SCOPe 2.08: Domain d2ydya_: 2ydy A:

Lineage for d2ydya_ (2ydy A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186944] (65 PDB entries)

8. Domain d2ydya_: 2ydy A: [244738]
   automated match to d3sc6a_
   complexed with cl, so4

Details for d2ydya_

PDB Entry: 2ydy, 2.25 Å

PDB Description: crystal structure of human s-adenosylmethionine synthetase 2, beta subunit in orthorhombic crystal form

PDB Compounds: (A:) methionine adenosyltransferase 2 subunit beta

SCOPe Domain Sequences for d2ydya_:

Sequence, based on SEQRES records:

>d2ydya_ c.2.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nrrvlvtgatgllgravhkefqqnnwhavgcgfrrarpkfeqvnlldsnavhhiihdfqp
hvivhcaaerrpdvvenqpdaasqlnvdasgnlakeaaavgafliyissdyvfdgtnppy
reedipaplnlygktkldgekavlennlgaavlripilygevekleesavtvmfdkvqfs
nksanmdhwqqrfpthvkdvatvcrqlaekrmldpsikgtfhwsgneqmtkyemacaiad
afnlpsshlrpitdspvlgaqrprnaqldcskletlgigqrtpfrigikeslwpfli

Sequence, based on observed residues (ATOM records):

>d2ydya_ c.2.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nrrvlvtgatgllgravhkefqqnnwhavgcgvhhiihdfqphvivhcavdasgnlakea
aavgafliyissdyvfdgtnppyreedipaplnlygktkldgekavlennlgaavlripi
lygevekleesavtvmfdkvqfsnksanmdhwqqrfpthvkdvatvcrqlaekrmldpsi
kgtfhwsgneqmtkyemacaiadafnlpsshlrpitdspvlgaqrprnaqldcskletlg
igqrtpfrigikeslwpfli

Timeline for d2ydya_:

• d2ydya_ first appeared in SCOPe 2.04
  
• d2ydya_ appears in SCOPe 2.07