Lineage for d2xfya_ (2xfy A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2830345Protein automated matches [190099] (31 species)
    not a true protein
  7. 2830365Species Barley (Hordeum vulgare) [TaxId:4513] [255684] (11 PDB entries)
  8. 2830368Domain d2xfya_: 2xfy A: [244499]
    automated match to d1b1ya_
    complexed with edo

Details for d2xfya_

PDB Entry: 2xfy (more details), 1.21 Å

PDB Description: crystal structure of barley beta-amylase complexed with alpha- cyclodextrin
PDB Compounds: (A:) beta-amylase

SCOPe Domain Sequences for d2xfya_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2xfya_ c.1.8.1 (A:) automated matches {Barley (Hordeum vulgare) [TaxId: 4513]}
nvkgnyvqvyvmlpldavsvnnrfekgdelraqlrklveagvdgvmvdvwwglvegkgpk
aydwsaykqlfelvqkaglklqaimsfhqcggnvgdavnipipqwvrdvgtrdpdifytd
ghgtrnieyltlgvdnqplfhgrsavqmyadymtsfrenmkefldagvivdievglgpag
emrypsypqshgwsfpgigeficydkylqadfkaaaaavghpewefpndvgqyndtpert
qffrdngtylsekgrfflawysnnlikhgdrildeankvflgykvqlaikisgihwwykv
pshaaeltagyynlhdrdgyrtiarmlkrhrasinftcaemrdseqssqamsapeelvqq
vlsagwreglnvacenalprydptayntilrnarphginqsgppehklfgftylrlsnql
vegqnyanfktfvdrmhanlprdpyvdpmaplprsgpeisiemilqaaqpklqpfpfqeh
tdlpvg

SCOPe Domain Coordinates for d2xfya_:

Click to download the PDB-style file with coordinates for d2xfya_.
(The format of our PDB-style files is described here.)

Timeline for d2xfya_: