SCOPe 2.04: Domain d2xfra_: 2xfr A:

Lineage for d2xfra_ (2xfr A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (19 species)
   not a true protein

7. Species Barley (Hordeum vulgare) [TaxId:4513] [255684] (8 PDB entries)

8. Domain d2xfra_: 2xfr A: [244498]
   automated match to d1b1ya_
   complexed with edo

Details for d2xfra_

PDB Entry: 2xfr, 0.97 Å

PDB Description: crystal structure of barley beta-amylase at atomic resolution

PDB Compounds: (A:) beta-amylase

SCOPe Domain Sequences for d2xfra_:

Sequence; same for both SEQRES and ATOM records:

>d2xfra_ c.1.8.1 (A:) automated matches {Barley (Hordeum vulgare) [TaxId: 4513]}
vnvkgnyvqvyvmlpldavsvnnrfekgdelraqlrklveagvdgvmvdvwwglvegkgp
kaydwsaykqlfelvqkaglklqaimsfhqcggnvgdavnipipqwvrdvgtrdpdifyt
dghgtrnieyltlgvdnqplfhgrsavqmyadymtsfrenmkefldagvivdievglgpa
gemrypsypqshgwsfpgigeficydkylqadfkaaaaavghpewefpndvgqyndtper
tqffrdngtylsekgrfflawysnnlikhgdrildeankvflgykvqlaikisgihwwyk
vpshaaeltagyynlhdrdgyrtiarmlkrhrasinftcaemrdseqssqamsapeelvq
qvlsagwreglnvacenalprydptayntilrnarphginqsgppehklfgftylrlsnq
lvegqnyanfktfvdrmhanlprdpyvdpmaplprsgpeisiemilqaaqpklqpfpfqe
htdlpvg

Timeline for d2xfra_:

• d2xfra_ is new in SCOPe 2.04-stable
  
• d2xfra_ appears in SCOPe 2.05
  
• d2xfra_ appears in the current release, SCOPe 2.08