SCOPe 2.06: Domain d2w2ib_: 2w2i B:

Lineage for d2w2ib_ (2w2i B:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.14: Histone demethylase core [254153] (4 proteins)
   Jumonji domain; Pfam PF02375 (JmjN) and Pfam PF02373 (JmjC); relationship to FIH1 (b.82.2.6) described in PubMed 16983801

6. Protein automated matches [254635] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [255633] (263 PDB entries)

8. Domain d2w2ib_: 2w2i B: [244011]
   automated match to d3dxua_
   complexed with gol, ni, pd2

Details for d2w2ib_

PDB Entry: 2w2i, 2.1 Å

PDB Description: crystal structure of the human 2-oxoglutarate oxygenase loc390245

PDB Compounds: (B:) 2-oxoglutarate oxygenase

SCOPe Domain Sequences for d2w2ib_:

Sequence, based on SEQRES records:

>d2w2ib_ b.82.2.14 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
htimtfyptmeefadfntyvaymesqgahqaglakvippkewkarqmyddiediliatpl
qqvtsgqggvftqyhkkkkamrvgqyrrlanskkyqtpphqnfadleqrywkshpgnppi
ygadisgslfeestkqwnlghlgtildlleqecgvviegvntpylyfgmwkttfawhted
mdlysinylhfgepktwyvvppehgqhlerlarelfpdisrgceaflrhkvalisptvlk
engipfncmtqeagefmvtfpygyhagfnhgfncaeainfatprwidygkmasqcscges
tvtfsmdpfvrivqpesyelwkh

Sequence, based on observed residues (ATOM records):

>d2w2ib_ b.82.2.14 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
htimtfyptmeefadfntyvaymesqgahqaglakvippkewkarqmyddiediliatpl
qqvtsgqggvftqyhkkkkamrvgqyrrlanskkyqtpphqnfadleqrywkshpgnppi
ygadisgslfeestkqwnlghlgtildlleqecgvviegvntpylyfgmwkttfawhted
mdlysinylhfgepktwyvvppehgqhlerlarelfpdlrhkvalisptvlkengipfnc
mtqeagefmvtfpygyhagfnhgfncaeainfatprwidygkmavtfsmdpfvrivqpes
yelwkh

Timeline for d2w2ib_:

• d2w2ib_ first appeared in SCOPe 2.04
  
• d2w2ib_ appears in SCOPe 2.05
  
• d2w2ib_ appears in SCOPe 2.07
  
• d2w2ib_ appears in the current release, SCOPe 2.08