SCOPe 2.05: Domain d2vsnb1: 2vsn B:23-192

Lineage for d2vsnb1 (2vsn B:23-192)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (9 families)

5. Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (18 proteins)
   this is a repeat family; one repeat unit is 1zb1 A:166-231 found in domain

6. Protein O-GlcNAc transferase, OGT [109973] (2 species)

7. Species Xanthomonas campestris [TaxId:314565] [254861] (1 PDB entry)

8. Domain d2vsnb1: 2vsn B:23-192 [243937]
   Other proteins in same PDB: d2vsna2, d2vsnb2
   complexed with udp

Details for d2vsnb1

PDB Entry: 2vsn, 2.75 Å

PDB Description: structure and topological arrangement of an o-glcnac transferase homolog: insight into molecular control of intracellular glycosylation

PDB Compounds: (B:) xcogt

SCOPe Domain Sequences for d2vsnb1:

Sequence, based on SEQRES records:

>d2vsnb1 a.118.8.1 (B:23-192) O-GlcNAc transferase, OGT {Xanthomonas campestris [TaxId: 314565]}
vawlmladaelgmgdttagemavqrglalhpghpeavarlgrvrwtqqrhaeaavllqqa
sdaapehpgialwlghaledagqaeaaaaaytrahqllpeepyitaqllnwrrrlcdwra
ldvlsaqvraavaqgvgavepfaflsedasaaeqlacartraqaiaasv

Sequence, based on observed residues (ATOM records):

>d2vsnb1 a.118.8.1 (B:23-192) O-GlcNAc transferase, OGT {Xanthomonas campestris [TaxId: 314565]}
vawlmladaelgagemavqrglpeavarlgrvrwtqqrhaeaavllqqasdaapehpgia
lwlghaledagqaeaaaaaytrahqllpeepyitaqllnwrrrlcdwraldvlsaqvraa
vaqgvgavepfaflsedasaaeqlacartraqaiaasv

Timeline for d2vsnb1:

• d2vsnb1 first appeared in SCOPe 2.04
  
• d2vsnb1 appears in SCOPe 2.06
  
• d2vsnb1 appears in the current release, SCOPe 2.08