Lineage for d2vk4a1 (2vk4 A:2-181)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1844143Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 1844144Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 1844736Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 1844737Protein automated matches [227126] (15 species)
    not a true protein
  7. 1844868Species Milk yeast (Kluyveromyces lactis) [TaxId:28985] [255610] (2 PDB entries)
  8. 1844869Domain d2vk4a1: 2vk4 A:2-181 [243894]
    Other proteins in same PDB: d2vk4a2, d2vk4b2, d2vk4c2, d2vk4d2
    automated match to d1qpba2
    complexed with mg, tpp

Details for d2vk4a1

PDB Entry: 2vk4 (more details), 1.95 Å

PDB Description: crystal structure of pyruvate decarboxylase from kluyveromyces lactis
PDB Compounds: (A:) pyruvate decarboxylase

SCOPe Domain Sequences for d2vk4a1:

Sequence, based on SEQRES records: (download)

>d2vk4a1 c.36.1.0 (A:2-181) automated matches {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}

Sequence, based on observed residues (ATOM records): (download)

>d2vk4a1 c.36.1.0 (A:2-181) automated matches {Milk yeast (Kluyveromyces lactis) [TaxId: 28985]}

SCOPe Domain Coordinates for d2vk4a1:

Click to download the PDB-style file with coordinates for d2vk4a1.
(The format of our PDB-style files is described here.)

Timeline for d2vk4a1: