SCOPe 2.06: Domain d2dzcb1: 2dzc B:1-188

Lineage for d2dzcb1 (2dzc B:1-188)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.2: Biotin holoenzyme synthetase [55707] (3 proteins)

6. Protein Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain [143640] (1 species)

7. Species Pyrococcus horikoshii [TaxId:53953] [143641] (27 PDB entries)
   Uniprot O57883 1-188

8. Domain d2dzcb1: 2dzc B:1-188 [241663]
   Other proteins in same PDB: d2dzca2, d2dzcb2
   automated match to d2dxua1
   mutant

Details for d2dzcb1

PDB Entry: 2dzc, 1.45 Å

PDB Description: crystal structure of biotin protein ligase from pyrococcus horikoshii, mutation r48a

PDB Compounds: (B:) biotin--[acetyl-CoA-carboxylase] ligase

SCOPe Domain Sequences for d2dzcb1:

Sequence, based on SEQRES records:

>d2dzcb1 d.104.1.2 (B:1-188) Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}
mlglktsiigrrviyfqeitstnefaktsyleegtvivadkqtmghgalnrkwespeggl
wlsivlspkvpqkdlpkivflgavgvvetlkefsidgrikwpndvlvnykkiagvlvegk
gdkivlgiglnvnnkvpngatsmklelgsevpllsvfrslitnldrlylnflknpmdiln
lvrdnmil

Sequence, based on observed residues (ATOM records):

>d2dzcb1 d.104.1.2 (B:1-188) Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}
mlglktsiigrrviyfqeitstnefaktsyleegtvivadkqtmgspegglwlsivlspk
vpqkdlpkivflgavgvvetlkefsidgrikwpndvlvnykkiagvlvegkgdkivlgig
lnvnnkvpngatsmklelgsevpllsvfrslitnldrlylnflknpmdilnlvrdnmil

Timeline for d2dzcb1:

• d2dzcb1 first appeared in SCOPe 2.04
  
• d2dzcb1 appears in SCOPe 2.05
  
• d2dzcb1 appears in SCOPe 2.07
  
• d2dzcb1 appears in the current release, SCOPe 2.08