SCOPe 2.04: Domain d2dbia_: 2dbi A:

Lineage for d2dbia_ (2dbi A:)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.12: YbiU-like [141636] (2 proteins)
   Pfam PF07350; DUF1479

6. Protein automated matches [254509] (1 species)
   not a true protein

7. Species Escherichia coli [TaxId:562] [255113] (2 PDB entries)

8. Domain d2dbia_: 2dbi A: [241543]
   automated match to d2csga1

Details for d2dbia_

PDB Entry: 2dbi, 2.05 Å

PDB Description: Crystal Structure of a Hypothetical Protein JW0805 from Escherichia coli

PDB Compounds: (A:) Hypothetical protein ybiU

SCOPe Domain Sequences for d2dbia_:

Sequence, based on SEQRES records:

>d2dbia_ b.82.2.12 (A:) automated matches {Escherichia coli [TaxId: 562]}
tftsdtlpadhkaairqmkhalraqlgdvqqifnqlsddiatrvaeinalkaqgdavwpv
lsyadikaghvtaeqreqikrrgcavikghfpreqalgwdqsmldyldrnrfdevykgpg
dnffgtlsasrpeiypiywsqaqmqarqseemanaqsflnrlwtfesdgkqwfnpdvsvi
ypdrirrrppgttskglgahtdsgalerwllpayqrvfanvfngnlaqydpwhaahrtev
eeytvdnttkcsvfrtfqgwtalsdmlpgqgllhvvpipeamayvllrpllddvpedelc
gvapgrvlpvseqwhplliealtsipkleagdsvwwhcdvihsvapvenqqgwgnvmyip
aapmceknlayahkvkaalekgaspgdfpredyetnwegrftladlnihgkralgm

Sequence, based on observed residues (ATOM records):

>d2dbia_ b.82.2.12 (A:) automated matches {Escherichia coli [TaxId: 562]}
tftsdtlpadhkaairqmkhalraqlgdvqqifnqlsddiatrvaeinalkaqgdavwpv
lsyadikaghvtaeqreqikrrgcavikghfpreqalgwdqsmldyldrnrfdevypeiy
piywsqaqmqarqseemanaqsflnrlwtfesdgkqwfnpdvsviypdrirrrppgttsk
glgahtdsgalerwllpayqrvfanvfngnlaqydpwhaahrteveeytvkcsvfrtfqg
wtalsdmlpgqgllhvvpipeamayvllrpllddvpedelcgvapgrvlpvseqwhplli
ealtsipkleagdsvwwhcdvihsvapvenqqgwgnvmyipaapmceknlayahkvkaal
ekgaspgdfpredyetnwegrftladlnihgkralgm

Timeline for d2dbia_:

• d2dbia_ is new in SCOPe 2.04-stable
  
• d2dbia_ appears in SCOPe 2.05
  
• d2dbia_ appears in the current release, SCOPe 2.08