SCOPe 2.05: Domain d1yvyb2: 1yvy B:1221-1518

Lineage for d1yvyb2 (1yvy B:1221-1518)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.91: PEP carboxykinase-like [53794] (1 superfamily)
   contains a P-loop NTP-binding motif; mixed beta-sheet folds into a barrel-like structure with helices packed on one side

4. Superfamily c.91.1: PEP carboxykinase-like [53795] (3 families)

5. Family c.91.1.0: automated matches [196141] (1 protein)
   not a true family

6. Protein automated matches [196142] (6 species)
   not a true protein

7. Species Anaerobiospirillum succiniciproducens [TaxId:13335] [230436] (2 PDB entries)

8. Domain d1yvyb2: 1yvy B:1221-1518 [241077]
   Other proteins in same PDB: d1yvya1, d1yvyb1
   automated match to d1ytma2

Details for d1yvyb2

PDB Entry: 1yvy, 2.35 Å

PDB Description: crystal structure of anaerobiospirillum succiniciproducens phosphoenolpyruvate carboxykinase

PDB Compounds: (B:) Phosphoenolpyruvate carboxykinase [ATP]

SCOPe Domain Sequences for d1yvyb2:

Sequence, based on SEQRES records:

>d1yvyb2 c.91.1.0 (B:1221-1518) automated matches {Anaerobiospirillum succiniciproducens [TaxId: 13335]}
iaamhcsantdlegkntaiffglsgtgkttlstdpkrlligddehgwdddgvfnfeggcy
akvinlskenepdiwgaikrnallenvtvdangkvdfadksvtentrvsypifhiknivk
pvskapaakrviflsadafgvlppvsilskeqtkyyflsgftaklagtergiteptptfs
scfgaafltlpptkyaevlvkrmeasgakaylvntgwngtgkrisikdtrgiidaildgs
idtantatipyfnftvptelkgvdtkildprntyadasewevkakdlaerfqknfkkf

Sequence, based on observed residues (ATOM records):

>d1yvyb2 c.91.1.0 (B:1221-1518) automated matches {Anaerobiospirillum succiniciproducens [TaxId: 13335]}
iaamhcsantdlegkntaiffglsgtgkttlstdpkrlligddehgwdddgvfnfeggcy
akvinlskenepdiwgaikrnallenvtvdangkvdfadksvtentrvsypifhiknivk
pvskapaakrviflsadafgvlppvsilskeqtkyyflsgftaptfsscfgaafltlppt
kyaevlvkrmeasgakaylvntgwngtgkrisikdtrgiidaildgsidtantatipyfn
ftvptelkgvdtkildprntyadasewevkakdlaerfqknfkkf

Timeline for d1yvyb2:

• d1yvyb2 first appeared in SCOPe 2.04
  
• d1yvyb2 appears in SCOPe 2.06
  
• d1yvyb2 appears in the current release, SCOPe 2.08