SCOPe 2.08: Domain d1ojlf_: 1ojl F:

Lineage for d1ojlf_ (1ojl F:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (158 species)
   not a true protein

7. Species Salmonella typhimurium [TaxId:602] [254883] (1 PDB entry)

8. Domain d1ojlf_: 1ojl F: [240748]
   automated match to d1ny6c_
   complexed with atp, po4

Details for d1ojlf_

PDB Entry: 1ojl, 3 Å

PDB Description: crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding

PDB Compounds: (F:) transcriptional regulatory protein zrar

SCOPe Domain Sequences for d1ojlf_:

Sequence, based on SEQRES records:

>d1ojlf_ c.37.1.0 (F:) automated matches {Salmonella typhimurium [TaxId: 602]}
hmigsspamqhllneiamvapsdatvlihgdsgtgkelvaralhacsarsdrplvtlnca
alneslleselfghekgaftgadkrregrfveadggtlfldeigdisplmqvrllraiqe
revqrvgsnqtisvdvrliaathrdlaeevsagrfrqdlyyrlnvvaiempslrqrredi
plladhflrrfaernrkvvkgftpqamdllihydwpgnirelenaieravvlltgeyise
relplaiaat

Sequence, based on observed residues (ATOM records):

>d1ojlf_ c.37.1.0 (F:) automated matches {Salmonella typhimurium [TaxId: 602]}
hmigsspamqhllneiamvapsdatvlihgdsgtgkelvaralhacsarsdrplvtlnca
alneslleselfghekgaftkrregrfveadggtlfldeigdisplmqvrllraiqerev
qrvgsnqtisvdvrliaathrdlaeevsagrfrqdlyyrlnvvaiempslrqrredipll
adhflrrfaernrkvvkgftpqamdllihydwpgnirelenaieravvlltgeyiserel
plaiaat

Timeline for d1ojlf_:

• d1ojlf_ first appeared in SCOPe 2.04
  
• d1ojlf_ appears in SCOPe 2.07