Lineage for d3sq8c1 (3sq8 C:79-293)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2977836Fold d.136: Phospholipase D/nuclease [56023] (1 superfamily)
    beta-alpha-beta-alpha-beta-alpha-beta(4)-alpha; mixed sheet: order 1765234
  4. 2977837Superfamily d.136.1: Phospholipase D/nuclease [56024] (6 families) (S)
  5. 2977862Family d.136.1.3: Tyrosyl-DNA phosphodiesterase TDP1 [69815] (2 proteins)
  6. 2978016Protein automated matches [233597] (1 species)
    not a true protein
  7. 2978017Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233598] (4 PDB entries)
  8. 2978030Domain d3sq8c1: 3sq8 C:79-293 [239747]
    Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
    automated match to d3sq8b1
    mutant

Details for d3sq8c1

PDB Entry: 3sq8 (more details), 2.1 Å

PDB Description: Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase 1 H432R Mutant (SCAN1 Mutant)
PDB Compounds: (C:) tyrosyl-DNA phosphodiesterase 1

SCOPe Domain Sequences for d3sq8c1:

Sequence, based on SEQRES records: (download)

>d3sq8c1 d.136.1.3 (C:79-293) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gavfklmksdfyeredfmgevedmitlkdifgtetlkrsilfsfqyeldfllrqfhqnve
nitivgqkgtimpiearamdatlavilkkvklieitmppfashhtkliinfydngeckif
lpsnnftsmetnlpqqvcwcspllkigkeglpvpfkrslieylnsyhlkdidelitksve
evnfaplselefvystpskfqssgllsfynklekl

Sequence, based on observed residues (ATOM records): (download)

>d3sq8c1 d.136.1.3 (C:79-293) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
gavfklmksdfyeredmitlkdifgtetlkrsilfsfqyeldfllrqfhqnvenitivgq
kgtimpiearamdatlavilkkvklieitmppfashhtkliinfydngeckiflpsnnft
smetnlpqqvcwcspllkigkeglpvpfkrslieylnsyhlkdidelitksveevnfapl
selefvystpskfqssgllsfynklekl

SCOPe Domain Coordinates for d3sq8c1:

Click to download the PDB-style file with coordinates for d3sq8c1.
(The format of our PDB-style files is described here.)

Timeline for d3sq8c1: