SCOPe 2.08: Domain d3rsjb2: 3rsj B:1086-1278

Lineage for d3rsjb2 (3rsj B:1086-1278)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.42: beta-Trefoil [50352] (8 superfamilies)
   barrel, closed; n=6, S=12; and a hairpin triplet; meander
   duplication: has internal pseudo threefold symmetry

4. Superfamily b.42.4: STI-like [50386] (3 families)

5. Family b.42.4.0: automated matches [191368] (1 protein)
   not a true family

6. Protein automated matches [190445] (12 species)
   not a true protein

7. Species Clostridium botulinum [TaxId:1491] [225676] (22 PDB entries)

8. Domain d3rsjb2: 3rsj B:1086-1278 [239698]
   Other proteins in same PDB: d3rsja1, d3rsjb1, d3rsjc1, d3rsjd1

Details for d3rsjb2

PDB Entry: 3rsj, 2 Å

PDB Description: structure of hcrf in complex with ganglioside gd1a

PDB Compounds: (B:) BoNT/F

SCOPe Domain Sequences for d3rsjb2:

Sequence, based on SEQRES records:

>d3rsjb2 b.42.4.0 (B:1086-1278) automated matches {Clostridium botulinum [TaxId: 1491]}
dpsilkdfwgnyllynkryyllnllrtdksitqnsnflninqqrgvyqkpnifsntrlyt
gveviirkngstdisntdnfvrkndlayinvvdrdveyrlyadisiakpekiiklirtsn
snnslgqiivmdsignnctmnfqnnnggnigllgfhsnnlvasswyynnirkntssngcf
wsfiskehgwqen

Sequence, based on observed residues (ATOM records):

>d3rsjb2 b.42.4.0 (B:1086-1278) automated matches {Clostridium botulinum [TaxId: 1491]}
dpsilkdfwgnyllynkryyllnllrtdksitqnsnflninqqrgvyqkpnifsntrlyt
gveviirknntdnfvrkndlayinvvdrdveyrlyadisiakpekiiklirtnnslgqii
vmdsignnctmnfqnnnggnigllgfhsnnlvasswyynnirkntssngcfwsfiskehg
wqen

Timeline for d3rsjb2:

• d3rsjb2 first appeared in SCOPe 2.04
  
• d3rsjb2 appears in SCOPe 2.07