SCOPe 2.06: Domain d3pdug1: 3pdu G:3-163

Lineage for d3pdug1 (3pdu G:3-163)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (239 species)
   not a true protein

7. Species Geobacter sulfurreducens [TaxId:35554] [233218] (1 PDB entry)

8. Domain d3pdug1: 3pdu G:3-163 [239603]
   Other proteins in same PDB: d3pdua2, d3pdua3, d3pdub2, d3pdub3, d3pduc2, d3pduc3, d3pdud2, d3pdud3, d3pdue2, d3pdue3, d3pduf2, d3pduf3, d3pdug2, d3pduh2, d3pduh3
   automated match to d3pduc1
   complexed with gol, nap

Details for d3pdug1

PDB Entry: 3pdu, 1.89 Å

PDB Description: crystal structure of gamma-hydroxybutyrate dehydrogenase from geobacter sulfurreducens in complex with nadp+

PDB Compounds: (G:) 3-hydroxyisobutyrate dehydrogenase family protein

SCOPe Domain Sequences for d3pdug1:

Sequence; same for both SEQRES and ATOM records:

>d3pdug1 c.2.1.0 (G:3-163) automated matches {Geobacter sulfurreducens [TaxId: 35554]}
tygflglgimggpmaanlvragfdvtvwnrnpakcaplvalgarqasspaevcaacditi
amladpaaarevcfgangvlegigggrgyidmstvddetstaigaavtarggrfleapvs
gtkkpaedgtliilaagdqslftdagpafaalgkkclhlge

Timeline for d3pdug1:

• d3pdug1 first appeared in SCOPe 2.04
  
• d3pdug1 appears in SCOPe 2.05
  
• d3pdug1 appears in SCOPe 2.07
  
• d3pdug1 appears in the current release, SCOPe 2.08