Lineage for d3dbrk1 (3dbr K:101-176)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2501291Protein Nedd8 [54244] (1 species)
  7. 2501292Species Human (Homo sapiens) [TaxId:9606] [54245] (16 PDB entries)
    Uniprot Q15843
  8. 2501320Domain d3dbrk1: 3dbr K:101-176 [239208]
    Other proteins in same PDB: d3dbra_, d3dbrb1, d3dbrb2, d3dbrc_, d3dbrd1, d3dbrd2, d3dbre_, d3dbrf1, d3dbrf2, d3dbrg_, d3dbrh1, d3dbrh2, d3dbri2, d3dbrj2, d3dbrk2, d3dbrl2
    automated match to d3dbhj_
    complexed with zn

Details for d3dbrk1

PDB Entry: 3dbr (more details), 3.05 Å

PDB Description: structural dissection of a gating mechanism preventing misactivation of ubiquitin by nedd8's e1 (appbp1-uba3arg190gln-nedd8ala72arg)
PDB Compounds: (K:) nedd8

SCOPe Domain Sequences for d3dbrk1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3dbrk1 d.15.1.1 (K:101-176) Nedd8 {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3dbrk1:

Click to download the PDB-style file with coordinates for d3dbrk1.
(The format of our PDB-style files is described here.)

Timeline for d3dbrk1: