Lineage for d2ymdd_ (2ymd D:)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1810672Fold b.96: Nicotinic receptor ligand binding domain-like [63711] (1 superfamily)
    sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds
  4. 1810673Superfamily b.96.1: Nicotinic receptor ligand binding domain-like [63712] (2 families) (S)
  5. 1811013Family b.96.1.0: automated matches [193505] (1 protein)
    not a true family
  6. 1811014Protein automated matches [193506] (5 species)
    not a true protein
  7. 1811015Species California sea hare (Aplysia californica) [TaxId:6500] [230583] (44 PDB entries)
  8. 1811044Domain d2ymdd_: 2ymd D: [239039]
    automated match to d2ymdh_
    complexed with gol, po4, sro; mutant

Details for d2ymdd_

PDB Entry: 2ymd (more details), 1.96 Å

PDB Description: Crystal structure of a mutant binding protein (5HTBP-AChBP) in complex with serotonin (5-hydroxytryptamine)
PDB Compounds: (D:) Soluble acetylcholine receptor

SCOPe Domain Sequences for d2ymdd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ymdd_ b.96.1.0 (D:) automated matches {California sea hare (Aplysia californica) [TaxId: 6500]}
qanlmrlksdlfnrspmypgptkddpltvtlgftlqdivkvdsstnevdlvyweqqrwkl
nslmwdpneygnitdfrtsaadiwtpditayestrpvqvlspqiavvthdgsvmfipaqr
lsfmcdptgvdseegvtcaltfgswvysgfeidlktdtdqvdlssyyasskyeilsatqt
rqvqhysccpepyidvnlvvkfrerragngff

SCOPe Domain Coordinates for d2ymdd_:

Click to download the PDB-style file with coordinates for d2ymdd_.
(The format of our PDB-style files is described here.)

Timeline for d2ymdd_: