Lineage for d2ymdc_ (2ymd C:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2408110Fold b.96: Nicotinic receptor ligand binding domain-like [63711] (1 superfamily)
    sandwich; 8 strands in 2 sheets; greek-key: partial topological similarity to immunoglobulin-like folds
  4. 2408111Superfamily b.96.1: Nicotinic receptor ligand binding domain-like [63712] (2 families) (S)
  5. 2408524Family b.96.1.0: automated matches [193505] (1 protein)
    not a true family
  6. 2408525Protein automated matches [193506] (4 species)
    not a true protein
  7. 2408526Species California sea hare (Aplysia californica) [TaxId:6500] [230583] (52 PDB entries)
  8. 2408549Domain d2ymdc_: 2ymd C: [239038]
    automated match to d2ymdh_
    complexed with gol, po4, sro; mutant

Details for d2ymdc_

PDB Entry: 2ymd (more details), 1.96 Å

PDB Description: Crystal structure of a mutant binding protein (5HTBP-AChBP) in complex with serotonin (5-hydroxytryptamine)
PDB Compounds: (C:) Soluble acetylcholine receptor

SCOPe Domain Sequences for d2ymdc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ymdc_ b.96.1.0 (C:) automated matches {California sea hare (Aplysia californica) [TaxId: 6500]}
qanlmrlksdlfnrspmypgptkddpltvtlgftlqdivkvdsstnevdlvyweqqrwkl
nslmwdpneygnitdfrtsaadiwtpditayestrpvqvlspqiavvthdgsvmfipaqr
lsfmcdptgvdseegvtcaltfgswvysgfeidlktdtdqvdlssyyasskyeilsatqt
rqvqhysccpepyidvnlvvkfrerragngff

SCOPe Domain Coordinates for d2ymdc_:

Click to download the PDB-style file with coordinates for d2ymdc_.
(The format of our PDB-style files is described here.)

Timeline for d2ymdc_: