Lineage for d2vg6a1 (2vg6 A:1-429)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3016464Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 3016465Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 3016821Family e.8.1.2: Reverse transcriptase [56686] (3 proteins)
  6. 3017298Protein automated matches [190211] (7 species)
    not a true protein
  7. 3017318Species Human immunodeficiency virus 1 [TaxId:11676] [186967] (7 PDB entries)
  8. 3017327Domain d2vg6a1: 2vg6 A:1-429 [238889]
    Other proteins in same PDB: d2vg6a2
    automated match to d2ykna1
    protein/DNA complex; protein/RNA complex; complexed with nnb

Details for d2vg6a1

PDB Entry: 2vg6 (more details), 3.01 Å

PDB Description: crystal structures of hiv-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
PDB Compounds: (A:) Reverse transcriptase/ribonuclease H

SCOPe Domain Sequences for d2vg6a1:

Sequence, based on SEQRES records: (download)

>d2vg6a1 e.8.1.2 (A:1-429) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdivi
yqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwt
vqpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeae
lelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrga
htndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntp
plvklwyql

Sequence, based on observed residues (ATOM records): (download)

>d2vg6a1 e.8.1.2 (A:1-429) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnpgiryqynvlpqgwkgspaifqssmtkilepfkkqnpdiviyq
ymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvq
pivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaele
laenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgaht
ndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntppl
vklwyql

SCOPe Domain Coordinates for d2vg6a1:

Click to download the PDB-style file with coordinates for d2vg6a1.
(The format of our PDB-style files is described here.)

Timeline for d2vg6a1:

View in 3D
Domains from same chain:
(mouse over for more information)
d2vg6a2
View in 3D
Domains from other chains:
(mouse over for more information)
d2vg6b_