SCOPe 2.05: Domain d2omta3: 2omt A:36-417

Lineage for d2omta3 (2omt A:36-417)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

5. Family c.10.2.1: Internalin LRR domain [52059] (4 proteins)
   capped at the N-end with a truncated EF-hand subdomain
   this is a repeat family; one repeat unit is 2omx A:261-239 found in domain

6. Protein Internalin A [82324] (1 species)

7. Species Listeria monocytogenes [TaxId:1639] [82325] (10 PDB entries)

8. Domain d2omta3: 2omt A:36-417 [238774]
   Other proteins in same PDB: d2omta1, d2omtb_
   automated match to d2omza2
   complexed with ca, cl

Details for d2omta3

PDB Entry: 2omt, 2 Å

PDB Description: crystal structure of inla g194s+s/hec1 complex

PDB Compounds: (A:) Internalin-A

SCOPe Domain Sequences for d2omta3:

Sequence; same for both SEQRES and ATOM records:

>d2omta3 c.10.2.1 (A:36-417) Internalin A {Listeria monocytogenes [TaxId: 1639]}
atitqdtpinqiftdtalaekmktvlgktnvtdtvsqtdldqvttlqadrlgiksidgve
ylnnltqinfsnnqltditplknltklvdilmnnnqiaditplanltnltgltlfnnqit
didplknltnlnrlelssntisdisalsgltslqqlsfssnqvtdlkplanlttlerldi
ssnkvsdisvlakltnlesliatnnqisditplgiltnldelslngnqlkdigtlasltn
ltdldlannqisnlaplsgltkltelklganqisnisplagltaltnlelnenqledisp
isnlknltyltlyfnnisdispvssltklqrlffynnkvsdvsslanltninwlsaghnq
isdltplanltritqlglndqa

Timeline for d2omta3:

• d2omta3 first appeared in SCOPe 2.04
  
• d2omta3 appears in SCOPe 2.06
  
• d2omta3 appears in the current release, SCOPe 2.08