SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.22: Histone-fold [47112] (1 superfamily)
core: 3 helices; long middle helix is flanked at each end with shorter ones
Superfamily a.22.1: Histone-fold [47113] (5 families)
Family a.22.1.0: automated matches [238448] (1 protein)
not a true family
Protein automated matches [238450] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [238452] (6 PDB entries)
1. Domains for 4nft:
  1. Domain d4nfta1: 4nft A:2-95 [238458]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa2
  2. Domain d4nfta2: 4nft A:98-186 [238459]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa1
  3. Domain d4nftb1: 4nft B:2-95 [238460]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa2
  4. Domain d4nftb2: 4nft B:98-186 [238461]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa1
  5. Domain d4nftc1: 4nft C:5-93 [238456]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa2
  6. Domain d4nftc2: 4nft C:98-186 [238457]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa1
  7. Domain d4nftd1: 4nft D:5-93 [238454]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa2
  8. Domain d4nftd2: 4nft D:98-186 [238455]
    Other proteins in same PDB: d4nfta3, d4nftb3
    automated match to d2jssa1
2. Domain for 5b31:
  - Domain d5b31g_: 5b31 G: [320409]
    Other proteins in same PDB: d5b31a_, d5b31b_, d5b31c_, d5b31d_, d5b31e_, d5b31f_, d5b31h_
    automated match to d1id3c_
    protein/DNA complex; complexed with cl, mn
3. Domain for 5b32:
  - Domain d5b32g_: 5b32 G: [320252]
    Other proteins in same PDB: d5b32a_, d5b32b_, d5b32c_, d5b32d_, d5b32e_, d5b32f_, d5b32h_
    automated match to d1id3c_
    protein/DNA complex; complexed with cl, mn
4. Domains for 5b33:
  1. Domain d5b33c_: 5b33 C: [320292]
    Other proteins in same PDB: d5b33a_, d5b33b_, d5b33d_, d5b33e_, d5b33f_, d5b33h_
    automated match to d1id3c_
    protein/DNA complex
  2. Domain d5b33g_: 5b33 G: [320320]
    Other proteins in same PDB: d5b33a_, d5b33b_, d5b33d_, d5b33e_, d5b33f_, d5b33h_
    automated match to d1id3c_
    protein/DNA complex
5. Domains for 5z30:
  1. Domain d5z30c_: 5z30 C: [355024]
    Other proteins in same PDB: d5z30b_, d5z30d_, d5z30f_
    automated match to d1id3c_
    protein/DNA complex; complexed with cl, mn; mutant
  2. Domain d5z30g_: 5z30 G: [355041]
    Other proteins in same PDB: d5z30b_, d5z30d_, d5z30f_
    automated match to d1id3c_
    protein/DNA complex; complexed with cl, mn; mutant
6. Domains for 6a7u:
  1. Domain d6a7ua1: 6a7u A:36-124 [365242]
    automated match to d4m6ba1
  2. Domain d6a7ua2: 6a7u A:145-225 [365244]
    automated match to d4m6ba2
Schizosaccharomyces pombe [TaxId:284812] [348606] (2 PDB entries)
1. Domains for 5y26:
  1. Domain d5y26b1: 5y26 B:1-87 [348607]
    Other proteins in same PDB: d5y26b2
    automated match to d5g49b_
    protein/DNA complex; complexed with gol
  2. Domain d5y26a_: 5y26 A: [348727]
    Other proteins in same PDB: d5y26b2
    automated match to d2bykd_
    protein/DNA complex; complexed with gol
2. Domains for 5y27:
  1. Domain d5y27a_: 5y27 A: [348624]
    Other proteins in same PDB: d5y27b2
    automated match to d2bykd_
    protein/DNA complex; complexed with gol
  2. Domain d5y27b1: 5y27 B:1-87 [348740]
    Other proteins in same PDB: d5y27b2
    automated match to d5g49b_
    protein/DNA complex; complexed with gol

More info for Protein automated matches from a.22.1.0: automated matches

Timeline for Protein automated matches from a.22.1.0: automated matches:

Protein automated matches from a.22.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from a.22.1.0: automated matches appears in SCOPe 2.06