Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2310256Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2310257Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2311120Family a.22.1.0: automated matches [238448] (1 protein)
    not a true family
  6. 2311121Protein automated matches [238450] (2 species)
    not a true protein

Species:

  1. 2311122Human (Homo sapiens) [TaxId:9606] [238452] (5 PDB entries)
    1. Domains for 4nft:
      1. 2311125Domain d4nfta1: 4nft A:2-95 [238458]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa2
      2. 2311126Domain d4nfta2: 4nft A:98-186 [238459]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa1
      3. 2311127Domain d4nftb1: 4nft B:2-95 [238460]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa2
      4. 2311128Domain d4nftb2: 4nft B:98-186 [238461]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa1
      5. 2311129Domain d4nftc1: 4nft C:5-93 [238456]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa2
      6. 2311130Domain d4nftc2: 4nft C:98-186 [238457]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa1
      7. 2311131Domain d4nftd1: 4nft D:5-93 [238454]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa2
      8. 2311132Domain d4nftd2: 4nft D:98-186 [238455]
        Other proteins in same PDB: d4nfta3, d4nftb3
        automated match to d2jssa1
    2. Domain for 5b31:
    3. Domain for 5b32:
    4. Domains for 5b33:
      1. 2311133Domain d5b33c_: 5b33 C: [320292]
        Other proteins in same PDB: d5b33a_, d5b33b_, d5b33d_, d5b33e_, d5b33f_, d5b33h_
        automated match to d1id3c_
        protein/DNA complex
      2. 2311134Domain d5b33g_: 5b33 G: [320320]
        Other proteins in same PDB: d5b33a_, d5b33b_, d5b33d_, d5b33e_, d5b33f_, d5b33h_
        automated match to d1id3c_
        protein/DNA complex
    5. Domains for 5z30:
      1. 3054962Domain d5z30c_: 5z30 C: [355024]
        Other proteins in same PDB: d5z30b_, d5z30d_, d5z30f_
        automated match to d1id3c_
        protein/DNA complex; complexed with cl, mn; mutant
      2. 3054979Domain d5z30g_: 5z30 G: [355041]
        Other proteins in same PDB: d5z30b_, d5z30d_, d5z30f_
        automated match to d1id3c_
        protein/DNA complex; complexed with cl, mn; mutant
  2. 3048544Schizosaccharomyces pombe [TaxId:284812] [348606] (2 PDB entries)
    1. Domains for 5y26:
      1. 3048545Domain d5y26b1: 5y26 B:1-87 [348607]
        Other proteins in same PDB: d5y26b2
        automated match to d5g49b_
        protein/DNA complex; complexed with gol
      2. 3048665Domain d5y26a_: 5y26 A: [348727]
        Other proteins in same PDB: d5y26b2
        automated match to d2bykd_
        protein/DNA complex; complexed with gol
    2. Domains for 5y27:
      1. 3048562Domain d5y27a_: 5y27 A: [348624]
        Other proteins in same PDB: d5y27b2
        automated match to d2bykd_
        protein/DNA complex; complexed with gol
      2. 3048678Domain d5y27b1: 5y27 B:1-87 [348740]
        Other proteins in same PDB: d5y27b2
        automated match to d5g49b_
        protein/DNA complex; complexed with gol

More info for Protein automated matches from a.22.1.0: automated matches

Timeline for Protein automated matches from a.22.1.0: automated matches: