Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3021955Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
    not a true fold, gathers together transmembrane barrels of different (n,S)
    annotated by the SCOP(e) curators as 'not a true fold'
  4. 3022096Superfamily f.4.3: Porins [56935] (5 families) (S)
  5. 3022290Family f.4.3.3: Ligand-gated protein channel [56948] (5 proteins)
    monomeric (22,24) barrel; ~150 N-terminal residues form a "plug" or "cork" subdomain
  6. 3022329Protein automated matches [238352] (2 species)
    not a true protein

Species:

  1. 3022330Escherichia coli [TaxId:511145] [238353] (1 PDB entry)
  2. 3022332Pseudomonas aeruginosa [TaxId:208964] [346563] (10 PDB entries)
    1. Domain for 5m9b:
    2. Domain for 5mzs:
    3. Domain for 5nc3:
    4. Domain for 5nc4:
    5. Domain for 5nr2:
    6. Domain for 5out:
    7. Domain for 6i2j:
    8. Domain for 6q5e:
    9. Domain for 6r1f:
    10. Domain for 6y47:

More info for Protein automated matches from f.4.3.3: Ligand-gated protein channel

Timeline for Protein automated matches from f.4.3.3: Ligand-gated protein channel: