Lineage for d4ok5b2 (4ok5 B:326-629)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2113070Family c.37.1.14: RNA helicase [52724] (4 protein domains)
    duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  6. 2113081Protein HCV helicase domain [52725] (1 species)
  7. 2113082Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [52726] (17 PDB entries)
  8. 2113102Domain d4ok5b2: 4ok5 B:326-629 [238295]
    automated match to d4ojqa2
    complexed with 2t2, ca

Details for d4ok5b2

PDB Entry: 4ok5 (more details), 2.15 Å

PDB Description: Crystal Structure of Hepatitis C Virus NS3 Helicase Inhibitor Co-complex with Compound 9 [1-(3-ethynylbenzyl)-1H-indol-3-yl]acetic acid]
PDB Compounds: (B:) Serine protease NS3

SCOPe Domain Sequences for d4ok5b2:

Sequence, based on SEQRES records: (download)

>d4ok5b2 c.37.1.14 (B:326-629) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
pgsvtvshpnieevalsttgeipfygkaiplevikggrhlifchskkkcdelaaklvalg
inavayyrgldvsviptngdvvvvstdalmtgftgdfdsvidcntcvtqtvdfsldptft
ietttlpqdavsrtqrrgrtgrgkpgiyrfvapgerpsgmfdssvlcecydagcawyelm
paettvrlraymntpglpvcqdhlefwegvftglthidahflsqtkqsgenfpylvayqa
tvcaraqapppswdqmwkclirlkptlhgptpllyrlgavqnevtlthpitkyimtcmsa
dlev

Sequence, based on observed residues (ATOM records): (download)

>d4ok5b2 c.37.1.14 (B:326-629) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
pgsvtvshpnieevalsttgeipfygkaiplevikggrhlifchskkkcdelaaklvalg
inavayyrgldvsviptngdvvvvstdalmtgdfdsvidcntcvtqtvdfsldptftiet
ttlpqdavsrtqrrgrtgrgkpgiyrfvapgerpsgmfdssvlcecydagcawyelmpae
ttvrlraymntpglpvcqdhlefwegvftglthidahflsqtkqsgenfpylvayqatvc
araqapppswdqmwkclirlkptlhgptpllyrlgavqnevtlthpitkyimtcmsadle
v

SCOPe Domain Coordinates for d4ok5b2:

Click to download the PDB-style file with coordinates for d4ok5b2.
(The format of our PDB-style files is described here.)

Timeline for d4ok5b2:

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Domains from same chain:
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d4ok5b1