Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097883Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. 2098369Superfamily c.8.8: Putative cyclase [102198] (2 families) (S)
    contains mixed beta-sheet barrel, closed n=7, S=10
  5. 2098380Family c.8.8.0: automated matches [238093] (1 protein)
    not a true family
  6. 2098381Protein automated matches [238095] (3 species)
    not a true protein

Species:

  1. 2098382Bacillus anthracis [TaxId:198094] [256229] (3 PDB entries)
    1. Domains for 4co9:
      1. 2098383Domain d4co9a_: 4co9 A: [251375]
        automated match to d4coba_
        complexed with dio, gxt, mg, zn
      2. 2098384Domain d4co9b_: 4co9 B: [251376]
        automated match to d4coba_
        complexed with dio, gxt, mg, zn
      3. 2098385Domain d4co9c_: 4co9 C: [251377]
        automated match to d4coba_
        complexed with dio, gxt, mg, zn
      4. 2098386Domain d4co9d_: 4co9 D: [251378]
        automated match to d4coba_
        complexed with dio, gxt, mg, zn
    2. Domains for 4coa:
      1. 2098391Domain d4coaa_: 4coa A: [307148]
        automated match to d4co9a_
        complexed with mg, vnj, zn
      2. 2098392Domain d4coab_: 4coa B: [307149]
        automated match to d4co9a_
        complexed with mg, vnj, zn
      3. 2098393Domain d4coac_: 4coa C: [307150]
        automated match to d4co9a_
        complexed with mg, vnj, zn
      4. 2098394Domain d4coad_: 4coa D: [307151]
        automated match to d4co9a_
        complexed with mg, vnj, zn
    3. Domains for 4cz1:
      1. 2098387Domain d4cz1a_: 4cz1 A: [256749]
        automated match to d4co9a_
        complexed with mg, vnj, zn
      2. 2098388Domain d4cz1b_: 4cz1 B: [257772]
        automated match to d4co9a_
        complexed with mg, vnj, zn
      3. 2098389Domain d4cz1c_: 4cz1 C: [257771]
        automated match to d4co9a_
        complexed with mg, vnj, zn
      4. 2098390Domain d4cz1d_: 4cz1 D: [259348]
        automated match to d4co9a_
        complexed with mg, vnj, zn
  2. 2098395Burkholderia cenocepacia [TaxId:216591] [238096] (1 PDB entry)
  3. 2098400Pseudomonas aeruginosa, PA01 [TaxId:208964] [238104] (1 PDB entry)

More info for Protein automated matches from c.8.8.0: automated matches

Timeline for Protein automated matches from c.8.8.0: automated matches: