SCOPe 2.08: Domain d3whkd1: 3whk D:169-427

Lineage for d3whkd1 (3whk D:169-427)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (158 species)
   not a true protein

7. Species Pyrococcus furiosus [TaxId:186497] [238073] (2 PDB entries)

8. Domain d3whkd1: 3whk D:169-427 [238077]
   Other proteins in same PDB: d3whka2, d3whkb2, d3whkc2, d3whkd2, d3whke2, d3whkf2, d3whkg2, d3whkh2
   automated match to d2qz4a_
   complexed with atp

Details for d3whkd1

PDB Entry: 3whk, 2.6 Å

PDB Description: crystal structure of pan-rpt5c chimera

PDB Compounds: (D:) Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A

SCOPe Domain Sequences for d3whkd1:

Sequence, based on SEQRES records:

>d3whkd1 c.37.1.0 (D:169-427) automated matches {Pyrococcus furiosus [TaxId: 186497]}
gfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcgk
tlmakaiahevnatfirvvgselvrkyigegarlvhelfelakekaptiifideidaiga
krldettggerevnrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlie
vplpdefsraqilqihsrkmttdddinwqelarstdefngaqlkavtveagmialrngqs
svkhedfvegisevqarks

Sequence, based on observed residues (ATOM records):

>d3whkd1 c.37.1.0 (D:169-427) automated matches {Pyrococcus furiosus [TaxId: 186497]}
gfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcgk
tlmakaiahevnatfirvvgselvregarlvhelfelakekaptiifideidaigakvnr
tlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlievplpdefsraqilqi
hsrkmttdddinwqelarstdefngaqlkavtveagmialrngqssvkhedfvegisevq
arks

Timeline for d3whkd1:

• d3whkd1 first appeared in SCOPe 2.03, called d3whkd_
  
• d3whkd1 appears in SCOPe 2.07