SCOPe 2.08: Domain d4c5nb_: 4c5n B:

Lineage for d4c5nb_ (4c5n B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.0: automated matches [191321] (1 protein)
   not a true family

6. Protein automated matches [190117] (50 species)
   not a true protein

7. Species Staphylococcus aureus [TaxId:1280] [187913] (4 PDB entries)

8. Domain d4c5nb_: 4c5n B: [237776]
   automated match to d1jxha_
   complexed with acp, pxl, so4, ueg

Details for d4c5nb_

PDB Entry: 4c5n, 1.75 Å

PDB Description: Structure of the pyridoxal kinase from Staphylococcus aureus in complex with AMP-PCP and pyridoxal

PDB Compounds: (B:) phosphomethylpyrimidine kinase

SCOPe Domain Sequences for d4c5nb_:

Sequence, based on SEQRES records:

>d4c5nb_ c.72.1.0 (B:) automated matches {Staphylococcus aureus [TaxId: 1280]}
galkkvltiagsdtsagagmqadlktfqeldtygmvaltaivtmdkdtwshdvtplpmdv
fekqletalsigpdaiktgmlgteeiikragevyeasnaqyfvvdpvmvckgedevlnpg
nteamikyllpkatvvtpnlfeagqlsglgklnsiedmkkaatiifdkgaqhviikggka
ldqdksydlyydgqtfyqlttdmfqqsynhgagctfaaattaylangkspkeavisakaf
vasaikngwkmndfvgpvdhgaynriehidvevtev

Sequence, based on observed residues (ATOM records):

>d4c5nb_ c.72.1.0 (B:) automated matches {Staphylococcus aureus [TaxId: 1280]}
galkkvltiagsdtsagagmqadlktfqeldtygmvaltaivtmdkdtwshdvtplpmdv
fekqletalsigpdaiktgmlgteeiikragevyeasnaqyfvvdpvmvlnpgnteamik
yllpkatvvtpnlfeagqlsglgklnsiedmkkaatiifdkgaqhviikggkaldqdksy
dlyydgqtfyqlttdmfqqsynhgagctfaaattaylangkspkeavisakafvasaikn
gwkmndfvgpvdhgaynriehidvevtev

Timeline for d4c5nb_:

• d4c5nb_ first appeared in SCOPe 2.03
  
• d4c5nb_ appears in SCOPe 2.07