Lineage for d4pnub2 (4pnu B:123-244)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2583354Fold d.131: DNA clamp [55978] (1 superfamily)
    contains two helices and two beta sheets
    duplication: fold has internal pseudo two-fold symmetry
  4. 2583355Superfamily d.131.1: DNA clamp [55979] (3 families) (S)
  5. 2583356Family d.131.1.1: DNA polymerase III, beta subunit [55980] (1 protein)
    duplication: consists of three domains of this fold
  6. 2583357Protein DNA polymerase III, beta subunit [55981] (2 species)
  7. 2583358Species Escherichia coli [TaxId:562] [55982] (30 PDB entries)
    Uniprot P00583
  8. 2583459Domain d4pnub2: 4pnu B:123-244 [237458]
    automated match to d3d1ga2
    complexed with 2vd, ca, cl, peg

Details for d4pnub2

PDB Entry: 4pnu (more details), 1.9 Å

PDB Description: e. coli sliding clamp in complex with (r)-6-bromo-9-(2-((r)-1-carboxy- 2-phenylethylamino)-2-oxoethyl)-2,3,4,9-tetrahydro-1h-carbazole-2- carboxylic acid
PDB Compounds: (B:) DNA polymerase III subunit beta

SCOPe Domain Sequences for d4pnub2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4pnub2 d.131.1.1 (B:123-244) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]}
qseveftlpqatmkrlieatqfsmahqdvryylngmlfetegeelrtvatdghrlavcsm
pigqslpshsvivprkgvielmrmldggdnplrvqigsnnirahvgdfiftsklvdgrfp
dy

SCOPe Domain Coordinates for d4pnub2:

Click to download the PDB-style file with coordinates for d4pnub2.
(The format of our PDB-style files is described here.)

Timeline for d4pnub2: