Lineage for d4cnma1 (4cnm A:60-344)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2098542Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 2098611Superfamily c.10.2: L domain-like [52058] (9 families) (S)
    less regular structure consisting of variable repeats
  5. 2098805Family c.10.2.0: automated matches [191489] (1 protein)
    not a true family
  6. 2098806Protein automated matches [190787] (11 species)
    not a true protein
  7. 2098812Species Human (Homo sapiens) [TaxId:9606] [188042] (12 PDB entries)
  8. 2098819Domain d4cnma1: 4cnm A:60-344 [237124]
    Other proteins in same PDB: d4cnma2
    automated match to d1ozna_
    complexed with cit, nag, peg

Details for d4cnma1

PDB Entry: 4cnm (more details), 1.75 Å

PDB Description: Crystal structure of human 5T4 (Wnt-activated inhibitory factor 1, Trophoblast glycoprotein)
PDB Compounds: (A:) trophoblast glycoprotein

SCOPe Domain Sequences for d4cnma1:

Sequence, based on SEQRES records: (download)

>d4cnma1 c.10.2.0 (A:60-344) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dqcpalcecseaartvkcvnrnltevptdlpayvrnlfltgnqlavlpagafarrpplae
laalnlsgsrldevragafehlpslrqldlshnpladlspfafsgsnasvsapsplveli
lnhivppederqnrsfegmvvaallagralqglrrlelasnhflylprdvlaqlpslrhl
dlsnnslvsltyvsfrnlthleslhlednalkvlhngtlaelqglphirvfldnnpwvcd
chmadmvtwlketevvqgkdrltcaypekmrnrvllelnsadldc

Sequence, based on observed residues (ATOM records): (download)

>d4cnma1 c.10.2.0 (A:60-344) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dqcpalcecseaartvkcvnrnltevptdlpayvrnlfltgnqlavlpagafarrpplae
laalnlsgsrldevragafehlpslrqldlshnpladlspfafsgsnpsplvelilnhiv
ppederqnrsfegmvvaallagralqglrrlelasnhflylprdvlaqlpslrhldlsnn
slvsltyvsfrnlthleslhlednalkvlhngtlaelqglphirvfldnnpwvcdchmad
mvtwlketevvqgkdrltcaypekmrnrvllelnsadldc

SCOPe Domain Coordinates for d4cnma1:

Click to download the PDB-style file with coordinates for d4cnma1.
(The format of our PDB-style files is described here.)

Timeline for d4cnma1:

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Domains from same chain:
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d4cnma2