SCOPe 2.08: Domain d4kmlb1: 4kml B:1-122

Lineage for d4kmlb1 (4kml B:1-122)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein automated matches [190119] (24 species)
   not a true protein

7. Species Llama (Lama glama) [TaxId:9844] [187485] (245 PDB entries)

8. Domain d4kmlb1: 4kml B:1-122 [237047]
   Other proteins in same PDB: d4kmlb2
   automated match to d2xa3a_

Details for d4kmlb1

PDB Entry: 4kml, 1.5 Å

PDB Description: probing the n-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a nanobody

PDB Compounds: (B:) Nanobody

SCOPe Domain Sequences for d4kmlb1:

Sequence; same for both SEQRES and ATOM records:

>d4kmlb1 b.1.1.1 (B:1-122) automated matches {Llama (Lama glama) [TaxId: 9844]}
avqlqesggglvqpggslrlscaasgrtfssynmgwfrqapgkgrefvasitssgdksdy
tdsvkgrftisrdnakntmylqmnnlkpedtatyycarglgiyiirarggydhwgqgtqv
tv

Timeline for d4kmlb1:

• d4kmlb1 first appeared in SCOPe 2.03, called d4kmlb_
  
• d4kmlb1 appears in SCOPe 2.07