Lineage for d4l1ka1 (4l1k A:2-139)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2444095Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
    3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
    possible rudiment form of Rossmann-fold domain
  4. 2444096Superfamily c.30.1: PreATP-grasp domain [52440] (10 families) (S)
    precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
  5. 2444442Family c.30.1.0: automated matches [227183] (1 protein)
    not a true family
  6. 2444443Protein automated matches [226903] (35 species)
    not a true protein
  7. 2444600Species Xanthomonas oryzae [TaxId:342109] [225704] (4 PDB entries)
  8. 2444604Domain d4l1ka1: 4l1k A:2-139 [237032]
    Other proteins in same PDB: d4l1ka2
    automated match to d3rfca1
    complexed with anp, mg

Details for d4l1ka1

PDB Entry: 4l1k (more details), 2.3 Å

PDB Description: crystal structure of d-alanine-d-alnine ligase from xanthomonas oryzae pv. oryzae with amppnp
PDB Compounds: (A:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d4l1ka1:

Sequence, based on SEQRES records: (download)

>d4l1ka1 c.30.1.0 (A:2-139) automated matches {Xanthomonas oryzae [TaxId: 342109]}

Sequence, based on observed residues (ATOM records): (download)

>d4l1ka1 c.30.1.0 (A:2-139) automated matches {Xanthomonas oryzae [TaxId: 342109]}

SCOPe Domain Coordinates for d4l1ka1:

Click to download the PDB-style file with coordinates for d4l1ka1.
(The format of our PDB-style files is described here.)

Timeline for d4l1ka1:

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