SCOPe 2.08: Domain d3zl6b1: 3zl6 B:1-292

Lineage for d3zl6b1 (3zl6 B:1-292)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [229469] (6 PDB entries)

8. Domain d3zl6b1: 3zl6 B:1-292 [236956]
   Other proteins in same PDB: d3zl6a2, d3zl6b2
   automated match to d3zcda_
   complexed with dms, mg, nvu

Details for d3zl6b1

PDB Entry: 3zl6, 1.85 Å

PDB Description: native structure of farnesyl pyrophosphate synthase from pseudomonas aeruginosa pao1, with bound fragment km10833.

PDB Compounds: (B:) Geranyltranstransferase

SCOPe Domain Sequences for d3zl6b1:

Sequence, based on SEQRES records:

>d3zl6b1 a.128.1.0 (B:1-292) automated matches {Pseudomonas aeruginosa, PA01 [TaxId: 208964]}
miaayqarcqarvdaaldalfvapreelqrlyeamrysvmnggkrvrpllayaacealgg
apqradaaacavelihayslvhddlpamddddlrrgqptthrafdeatailaadglqala
fevladtrrnpqehavclemltrlaraagsagmvggqaidlgsvgvaldqaalevmhrhk
tgalieasvrlgalasgraepaslaaleryaeaiglafqvqddildvesdtatlgktqgk
dqahnkptypallgleaakgyalelrdlalaaldgfppsadplrqlaryive

Sequence, based on observed residues (ATOM records):

>d3zl6b1 a.128.1.0 (B:1-292) automated matches {Pseudomonas aeruginosa, PA01 [TaxId: 208964]}
miaayqarcqarvdaaldalfvapreelqrlyeamrysvmnggkrvrpllayaacealgg
apqradaaacavelihayslvhddlpamddddlrrgqptthrafdeatailaadglqala
fevladtrrnpqehavclemltrlaraagsagmvggqaidlgsvgvaldqaalevmhrhk
tgalieasvrlgalasgraepaslaaleryaeaiglafqvqddildvptypallgleaak
gyalelrdlalaaldgfppsadplrqlaryive

Timeline for d3zl6b1:

• d3zl6b1 first appeared in SCOPe 2.03, called d3zl6b_
  
• d3zl6b1 appears in SCOPe 2.07