SCOPe 2.08: Domain d4nuvb_: 4nuv B:

Lineage for d4nuvb_ (4nuv B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.264: Duffy binding domain-like [140923] (1 superfamily)
   consist of two subdomains, each containing a three-helical bundle

4. Superfamily a.264.1: Duffy binding domain-like [140924] (2 families)
   automatically mapped to Pfam PF05424

5. Family a.264.1.1: Duffy binding domain [140925] (3 proteins)
   Pfam PF05424

6. Protein automated matches [191262] (2 species)
   not a true protein

7. Species Plasmodium vivax [TaxId:126793] [189825] (5 PDB entries)

8. Domain d4nuvb_: 4nuv B: [236626]
   automated match to d3rrca_
   complexed with gol

Details for d4nuvb_

PDB Entry: 4nuv, 2.6 Å

PDB Description: heterotetramer structure of region ii from plasmodium vivax duffy binding protein (pvdbp) bound to the ectodomain of the duffy antigen receptor for chemokines (darc)

PDB Compounds: (B:) Duffy receptor

SCOPe Domain Sequences for d4nuvb_:

Sequence, based on SEQRES records:

>d4nuvb_ a.264.1.1 (B:) automated matches {Plasmodium vivax [TaxId: 126793]}
mkncnykrkrrerdwdcntkkdvcipdrryqlcmkeltnlvnntdtnfhrditfrklylk
rkliydaavegdlllklnnyrynkdfckdirwslgdfgdiimgtdmegigyskvvennlr
sifgtdekaqqrrkqwwneskaqiwtammysvkkrlkgnfiwicklnvavniepqiyrwi
rewgrdyvselptevqklkekcdgkinytdkkvckvppcqnacksydqwitrkknqwdvl
snkfisvknaekvqtagivtpydilkqeldefnevafeneinkrdgayielcvcs

Sequence, based on observed residues (ATOM records):

>d4nuvb_ a.264.1.1 (B:) automated matches {Plasmodium vivax [TaxId: 126793]}
mkncnykrkrrerdwdcntkkdvcipdrryqlcmkeltnlvhrditfrklylkrkliyda
avegdlllklnnyrynkdfckdirwslgdfgdiimgtdmegigyskvvennlrsifgtde
kaqqrrkqwwneskaqiwtammysvkkrlkgnfiwicklnvavniepqiyrwirewgrdy
vselptevqklkekcdgkinytdkkvckvppcqnacksydqwitrkknqwdvlsnkfisv
knaekvqtagivtpydilkqeldefnevafeneinkrdgayielcvcs

Timeline for d4nuvb_:

• d4nuvb_ first appeared in SCOPe 2.03
  
• d4nuvb_ appears in SCOPe 2.07