Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3024792Fold f.23: Single transmembrane helix [81407] (42 superfamilies)
    not a true fold
    annotated by the SCOP(e) curators as 'not a true fold'
  4. 3026109Superfamily f.23.16: Subunit III of photosystem I reaction centre, PsaF [81536] (2 families) (S)
    automatically mapped to Pfam PF02507
  5. 3026110Family f.23.16.1: Subunit III of photosystem I reaction centre, PsaF [81535] (2 proteins)
  6. 3026117Protein automated matches [236583] (4 species)
    not a true protein

Species:

  1. 3026118Nostoc sp. [TaxId:103690] [375538] (1 PDB entry)
  2. 3026120Synechocystis sp. [TaxId:1111708] [347847] (2 PDB entries)
    1. Domains for 5oy0:
      1. 3026121Domain d5oy06_: 5oy0 6: [348901]
        Other proteins in same PDB: d5oy00_, d5oy01_, d5oy02_, d5oy03_, d5oy04_, d5oy05_, d5oy07_, d5oy08_, d5oy0a_, d5oy0b_, d5oy0c_, d5oy0d_, d5oy0e_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4kt0f_
        complexed with 45d, act, bcr, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd, zex
      2. 3026122Domain d5oy0f_: 5oy0 F: [347848]
        Other proteins in same PDB: d5oy00_, d5oy01_, d5oy02_, d5oy03_, d5oy04_, d5oy05_, d5oy07_, d5oy08_, d5oy0a_, d5oy0b_, d5oy0c_, d5oy0d_, d5oy0e_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4kt0f_
        complexed with 45d, act, bcr, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd, zex
    2. Domains for 6uzv:
      1. 3026123Domain d6uzv6_: 6uzv 6: [392499]
        Other proteins in same PDB: d6uzv0_, d6uzv1_, d6uzv2_, d6uzv3_, d6uzv4_, d6uzv5_, d6uzv7_, d6uzv8_, d6uzva_, d6uzvb_, d6uzvc_, d6uzvd_, d6uzve_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvk_, d6uzvl_
        automated match to d4kt0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
      2. 3026124Domain d6uzvf_: 6uzv F: [392520]
        Other proteins in same PDB: d6uzv0_, d6uzv1_, d6uzv2_, d6uzv3_, d6uzv4_, d6uzv5_, d6uzv7_, d6uzv8_, d6uzva_, d6uzvb_, d6uzvc_, d6uzvd_, d6uzve_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvk_, d6uzvl_
        automated match to d4kt0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
  3. 3026125Synechocystis sp. [TaxId:1148] [236584] (1 PDB entry)
  4. 3026127Thermosynechococcus elongatus [TaxId:197221] [377791] (4 PDB entries)
    1. Domains for 6pfy:
      1. 3026133Domain d6pfyd_: 6pfy d: [377792]
        Other proteins in same PDB: d6pfya_, d6pfyb_, d6pfyc_, d6pfye_, d6pfyg_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_, d6pfyy_, d6pfyz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      2. 3026134Domain d6pfyf_: 6pfy F: [377885]
        Other proteins in same PDB: d6pfya_, d6pfyb_, d6pfyc_, d6pfye_, d6pfyg_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_, d6pfyy_, d6pfyz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      3. 3026135Domain d6pfyq_: 6pfy Q: [377959]
        Other proteins in same PDB: d6pfya_, d6pfyb_, d6pfyc_, d6pfye_, d6pfyg_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_, d6pfyy_, d6pfyz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
    2. Domain for 6tra:
    3. Domains for 6trc:
      1. 3026129Domain d6trc6_: 6trc 6: [392086]
        Other proteins in same PDB: d6trc0_, d6trc1_, d6trc2_, d6trc3_, d6trc4_, d6trc5_, d6trc7_, d6trc8_, d6trca_, d6trcb_, d6trcc_, d6trcd_, d6trce_, d6trci_, d6trcj_, d6trcl_, d6trcm_, d6trcx_, d6trcy_, d6trcz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      2. 3026130Domain d6trcf_: 6trc f: [392054]
        Other proteins in same PDB: d6trc0_, d6trc1_, d6trc2_, d6trc3_, d6trc4_, d6trc5_, d6trc7_, d6trc8_, d6trca_, d6trcb_, d6trcc_, d6trcd_, d6trce_, d6trci_, d6trcj_, d6trcl_, d6trcm_, d6trcx_, d6trcy_, d6trcz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
    4. Domains for 6trd:
      1. 3026131Domain d6trd6_: 6trd 6: [392081]
        Other proteins in same PDB: d6trd0_, d6trd1_, d6trd2_, d6trd3_, d6trd4_, d6trd5_, d6trd7_, d6trd8_, d6trd9_, d6trda_, d6trdb_, d6trdc_, d6trdd_, d6trde_, d6trdi_, d6trdj_, d6trdk_, d6trdl_, d6trdm_, d6trdx_, d6trdy_, d6trdz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      2. 3026132Domain d6trdf_: 6trd f: [392041]
        Other proteins in same PDB: d6trd0_, d6trd1_, d6trd2_, d6trd3_, d6trd4_, d6trd5_, d6trd7_, d6trd8_, d6trd9_, d6trda_, d6trdb_, d6trdc_, d6trdd_, d6trde_, d6trdi_, d6trdj_, d6trdk_, d6trdl_, d6trdm_, d6trdx_, d6trdy_, d6trdz_
        automated match to d1jb0f_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4

More info for Protein automated matches from f.23.16.1: Subunit III of photosystem I reaction centre, PsaF

Timeline for Protein automated matches from f.23.16.1: Subunit III of photosystem I reaction centre, PsaF: