SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

Fold d.187: Photosystem I subunit PsaD [64233] (1 superfamily)
beta-BETA(2)-beta-alpha-beta(2); antiparallel sheet: order 2134 packed against helix and BETA-hairpin on the same side; irregular C-terminal tail

Superfamily d.187.1: Photosystem I subunit PsaD [64234] (1 family)
automatically mapped to Pfam PF02531
Family d.187.1.1: Photosystem I subunit PsaD [64235] (2 proteins)
Protein automated matches [236562] (3 species)
not a true protein

Species:

Pea (Pisum sativum) [TaxId:3888] [276208] (3 PDB entries)

Domain for 4rku:

Domain d4rkud_: 4rku D: [309466]
Other proteins in same PDB: d4rku3_, d4rku4_, d4rkua_, d4rkub_, d4rkuc_, d4rkue_, d4rkuf_, d4rkuj_
automated match to d4y28d_
complexed with bcr, cl0, cla, dgd, g3p, lhg, lmg, lut, nex, pqn, sf4

Domain for 4y28:

Domain d4y28d_: 4y28 D: [276210]
Other proteins in same PDB: d4y281_, d4y282_, d4y283_, d4y284_, d4y28a_, d4y28b_, d4y28c_, d4y28e_, d4y28f_, d4y28j_
automated match to d4kt0d_
complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex

Domain for 5l8r:

Domain d5l8rd_: 5l8r D: [341216]
Other proteins in same PDB: d5l8r1_, d5l8r2_, d5l8r3_, d5l8r4_, d5l8ra_, d5l8rb_, d5l8rc_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
automated match to d4y28d_
complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex

Soybean (Glycine max) [TaxId:3847] [311475] (1 PDB entry)

Domain for 4xk8:

Domain d4xk8d_: 4xk8 D: [310036]
Other proteins in same PDB: d4xk81_, d4xk82_, d4xk83_, d4xk84_, d4xk86_, d4xk87_, d4xk88_, d4xk89_, d4xk8a_, d4xk8b_, d4xk8c_, d4xk8e_, d4xk8f_, d4xk8j_
automated match to d4y28d_
complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat

Synechocystis sp. [TaxId:1148] [236566] (1 PDB entry)
- Domain for 4kt0:
  - Domain d4kt0d_: 4kt0 D: [236685]
    Other proteins in same PDB: d4kt0a_, d4kt0b_, d4kt0c_, d4kt0e_, d4kt0f_, d4kt0j_
    automated match to d1jb0d_
    complexed with bcr, cl, cl0, cla, lhg, lmg, lmu, pqn, sf4

More info for Protein automated matches from d.187.1.1: Photosystem I subunit PsaD

Timeline for Protein automated matches from d.187.1.1: Photosystem I subunit PsaD:

Protein automated matches from d.187.1.1: Photosystem I subunit PsaD first appeared in SCOPe 2.03
Protein automated matches from d.187.1.1: Photosystem I subunit PsaD appears in SCOPe 2.05
Protein automated matches from d.187.1.1: Photosystem I subunit PsaD appears in SCOPe 2.07
Protein automated matches from d.187.1.1: Photosystem I subunit PsaD appears in the current release, SCOPe 2.08