Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2626587Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2633135Fold f.29: Photosystem I subunits PsaA/PsaB [81559] (1 superfamily)
    core:11 transmembrane helices
  4. 2633136Superfamily f.29.1: Photosystem I subunits PsaA/PsaB [81558] (2 families) (S)
    automatically mapped to Pfam PF00223
  5. 2633137Family f.29.1.1: Photosystem I subunits PsaA/PsaB [81557] (3 proteins)
    Photosystem I p700 chlorophyll a apoprotein a1/a2
  6. 2633148Protein automated matches [236561] (7 species)
    not a true protein

Species:

  1. 2633149Chaetoceros gracilis [TaxId:184592] [391015] (1 PDB entry)
  2. 2633152Chlamydomonas reinhardtii [TaxId:3055] [370420] (4 PDB entries)
    1. Domains for 6jo5:
      1. 2633158Domain d6jo5a_: 6jo5 A: [370548]
        Other proteins in same PDB: d6jo51_, d6jo53_, d6jo54_, d6jo57_, d6jo58_, d6jo59_, d6jo5c_, d6jo5d_, d6jo5e_, d6jo5f_, d6jo5j_, d6jo5z_
        automated match to d4y28a_
        complexed with bcr, chl, cl0, cla, dgd, lhg, lmg, lut, pqn, sf4
      2. 2633159Domain d6jo5b_: 6jo5 B: [370607]
        Other proteins in same PDB: d6jo51_, d6jo53_, d6jo54_, d6jo57_, d6jo58_, d6jo59_, d6jo5c_, d6jo5d_, d6jo5e_, d6jo5f_, d6jo5j_, d6jo5z_
        automated match to d5l8rb_
        complexed with bcr, chl, cl0, cla, dgd, lhg, lmg, lut, pqn, sf4
    2. Domains for 6jo6:
      1. 2633156Domain d6jo6a_: 6jo6 A: [370461]
        Other proteins in same PDB: d6jo61_, d6jo63_, d6jo64_, d6jo67_, d6jo68_, d6jo6c_, d6jo6d_, d6jo6e_, d6jo6f_, d6jo6j_, d6jo6z_
        automated match to d4y28a_
        complexed with bcr, chl, cl0, cla, dgd, lhg, lmg, lut, pqn, sf4
      2. 2633157Domain d6jo6b_: 6jo6 B: [370421]
        Other proteins in same PDB: d6jo61_, d6jo63_, d6jo64_, d6jo67_, d6jo68_, d6jo6c_, d6jo6d_, d6jo6e_, d6jo6f_, d6jo6j_, d6jo6z_
        automated match to d5l8rb_
        complexed with bcr, chl, cl0, cla, dgd, lhg, lmg, lut, pqn, sf4
    3. Domains for 7dz7:
      1. 2633153Domain d7dz7a_: 7dz7 A: [405175]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7u_, d7dz7v_, d7dz7w_, d7dz7x_, d7dz7y_, d7dz7z_
        automated match to d4y28a_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
      2. 2633154Domain d7dz7b_: 7dz7 B: [405226]
        Other proteins in same PDB: d7dz71_, d7dz73_, d7dz74_, d7dz77_, d7dz78_, d7dz79_, d7dz7c_, d7dz7d_, d7dz7e_, d7dz7f_, d7dz7j_, d7dz7u_, d7dz7v_, d7dz7w_, d7dz7x_, d7dz7y_, d7dz7z_
        automated match to d1jb0b_
        complexed with bcr, chl, cla, dgd, lhg, lmg, lmu, lut, nex, pqn, sf4, tpo, xat; mutant
    4. Domain for 7dz8:
  3. 2633160Nostoc sp. [TaxId:103690] [375529] (1 PDB entry)
  4. 2633163Pea (Pisum sativum) [TaxId:3888] [276242] (8 PDB entries)
    1. Domain for 4rku:
    2. Domains for 4xk8:
      1. 2633174Domain d4xk8a_: 4xk8 A: [310033]
        Other proteins in same PDB: d4xk81_, d4xk82_, d4xk83_, d4xk84_, d4xk86_, d4xk87_, d4xk88_, d4xk89_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y28a_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      2. 2633175Domain d4xk8b_: 4xk8 B: [310034]
        Other proteins in same PDB: d4xk81_, d4xk82_, d4xk83_, d4xk84_, d4xk86_, d4xk87_, d4xk88_, d4xk89_, d4xk8c_, d4xk8d_, d4xk8e_, d4xk8f_, d4xk8j_
        automated match to d4y28b_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
    3. Domains for 4y28:
      1. 2633176Domain d4y28a_: 4y28 A: [276246]
        Other proteins in same PDB: d4y281_, d4y282_, d4y283_, d4y284_, d4y28c_, d4y28d_, d4y28e_, d4y28f_, d4y28j_
        automated match to d4kt0a_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex
      2. 2633177Domain d4y28b_: 4y28 B: [276243]
        Other proteins in same PDB: d4y281_, d4y282_, d4y283_, d4y284_, d4y28c_, d4y28d_, d4y28e_, d4y28f_, d4y28j_
        automated match to d1jb0b_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmu, lut, pqn, sf4, zex
    4. Domains for 5l8r:
      1. 2633172Domain d5l8ra_: 5l8r A: [341210]
        Other proteins in same PDB: d5l8r1_, d5l8r2_, d5l8r3_, d5l8r4_, d5l8rc_, d5l8rd_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
        automated match to d4y28a_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex
      2. 2633173Domain d5l8rb_: 5l8r B: [341237]
        Other proteins in same PDB: d5l8r1_, d5l8r2_, d5l8r3_, d5l8r4_, d5l8rc_, d5l8rd_, d5l8re1, d5l8re2, d5l8rf_, d5l8rj_
        automated match to d4xk8b_
        complexed with bcr, ca, chl, cl0, cla, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat, zex
    5. Domains for 6yac:
      1. 2633166Domain d6yaca_: 6yac A: [393654]
        Other proteins in same PDB: d6yac1_, d6yac2_, d6yac3_, d6yac4_, d6yacc_, d6yacd_, d6yace1, d6yace2, d6yacf_, d6yacj_, d6yacn_
        automated match to d5l8ra_
        complexed with bcr, c7z, ca, chl, cl0, cla, dgd, fes, lhg, lmg, lmt, lut, pqn, sf4, xat
      2. 2633167Domain d6yacb_: 6yac B: [393638]
        Other proteins in same PDB: d6yac1_, d6yac2_, d6yac3_, d6yac4_, d6yacc_, d6yacd_, d6yace1, d6yace2, d6yacf_, d6yacj_, d6yacn_
        automated match to d5l8rb_
        complexed with bcr, c7z, ca, chl, cl0, cla, dgd, fes, lhg, lmg, lmt, lut, pqn, sf4, xat
    6. Domains for 6yez:
      1. 2633170Domain d6yeza_: 6yez A: [393662]
        Other proteins in same PDB: d6yez1_, d6yez2_, d6yez3_, d6yez4_, d6yezc_, d6yezd_, d6yeze1, d6yeze2, d6yezf_, d6yezj_, d6yezn_, d6yezp_
        automated match to d5l8ra_
        complexed with 3ph, bcr, c7z, ca, chl, cl0, cla, cu, dgd, fes, lhg, lmg, lmt, lut, pqn, sf4, xat
      2. 2633171Domain d6yezb_: 6yez B: [393657]
        Other proteins in same PDB: d6yez1_, d6yez2_, d6yez3_, d6yez4_, d6yezc_, d6yezd_, d6yeze1, d6yeze2, d6yezf_, d6yezj_, d6yezn_, d6yezp_
        automated match to d5l8rb_
        complexed with 3ph, bcr, c7z, ca, chl, cl0, cla, cu, dgd, fes, lhg, lmg, lmt, lut, pqn, sf4, xat
    7. Domains for 6zoo:
      1. 2633168Domain d6zooa_: 6zoo A: [407514]
        Other proteins in same PDB: d6zoo1_, d6zoo2_, d6zoo3_, d6zoo4_, d6zooc_, d6zood_, d6zooe1, d6zooe2, d6zoof_, d6zooj_, d6zoop_
        automated match to d5l8ra_
        complexed with 3ph, bcr, ca, chl, cl0, cla, cu, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat
      2. 2633169Domain d6zoob_: 6zoo B: [407509]
        Other proteins in same PDB: d6zoo1_, d6zoo2_, d6zoo3_, d6zoo4_, d6zooc_, d6zood_, d6zooe1, d6zooe2, d6zoof_, d6zooj_, d6zoop_
        automated match to d5l8rb_
        complexed with 3ph, bcr, ca, chl, cl0, cla, cu, dgd, lhg, lmg, lmt, lut, pqn, sf4, xat
    8. Domains for 7dkz:
      1. 2633164Domain d7dkza_: 7dkz A: [402069]
        Other proteins in same PDB: d7dkz1_, d7dkz2_, d7dkz3_, d7dkz4_, d7dkzc_, d7dkzd_, d7dkze1, d7dkze2, d7dkzf_, d7dkzj_
        automated match to d5l8ra_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
      2. 2633165Domain d7dkzb_: 7dkz B: [401965]
        Other proteins in same PDB: d7dkz1_, d7dkz2_, d7dkz3_, d7dkz4_, d7dkzc_, d7dkzd_, d7dkze1, d7dkze2, d7dkzf_, d7dkzj_
        automated match to d5oy02_
        complexed with bcr, chl, cla, dgd, htg, lhg, lmg, lmt, lut, pqn, sf4, xat
  5. 2633179Synechocystis sp. [TaxId:1111708] [347297] (2 PDB entries)
    1. Domains for 5oy0:
      1. 2633180Domain d5oy01_: 5oy0 1: [348220]
        Other proteins in same PDB: d5oy00_, d5oy03_, d5oy04_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0c_, d5oy0d_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4y28a_
        complexed with 45d, act, bcr, c7z, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd
      2. 2633181Domain d5oy02_: 5oy0 2: [347298]
        Other proteins in same PDB: d5oy00_, d5oy03_, d5oy04_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0c_, d5oy0d_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d5l8rb_
        complexed with 45d, act, bcr, c7z, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd
      3. 2633182Domain d5oy0a_: 5oy0 A: [348113]
        Other proteins in same PDB: d5oy00_, d5oy03_, d5oy04_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0c_, d5oy0d_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4y28a_
        complexed with 45d, act, bcr, c7z, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd
      4. 2633183Domain d5oy0b_: 5oy0 b: [347300]
        Other proteins in same PDB: d5oy00_, d5oy03_, d5oy04_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0c_, d5oy0d_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4kt0b_
        complexed with 45d, act, bcr, c7z, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd
    2. Domains for 6uzv:
      1. 2633184Domain d6uzv1_: 6uzv 1: [392504]
        Other proteins in same PDB: d6uzv0_, d6uzv3_, d6uzv4_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzvc_, d6uzvd_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvl_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
      2. 2633185Domain d6uzv2_: 6uzv 2: [392591]
        Other proteins in same PDB: d6uzv0_, d6uzv3_, d6uzv4_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzvc_, d6uzvd_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvl_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
      3. 2633186Domain d6uzva_: 6uzv a: [392537]
        Other proteins in same PDB: d6uzv0_, d6uzv3_, d6uzv4_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzvc_, d6uzvd_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvl_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
      4. 2633187Domain d6uzvb_: 6uzv b: [392503]
        Other proteins in same PDB: d6uzv0_, d6uzv3_, d6uzv4_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzvc_, d6uzvd_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvl_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
  6. 2633188Synechocystis sp. [TaxId:1148] [236567] (1 PDB entry)
  7. 2633191Thermosynechococcus elongatus [TaxId:197221] [377774] (4 PDB entries)
    1. Domains for 6pfy:
      1. 2633199Domain d6pfya_: 6pfy A: [377779]
        Other proteins in same PDB: d6pfyc_, d6pfyd_, d6pfye_, d6pfyf_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyq_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      2. 2633200Domain d6pfyb_: 6pfy B: [377778]
        Other proteins in same PDB: d6pfyc_, d6pfyd_, d6pfye_, d6pfyf_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyq_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      3. 2633201Domain d6pfyg_: 6pfy G: [377955]
        Other proteins in same PDB: d6pfyc_, d6pfyd_, d6pfye_, d6pfyf_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyq_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      4. 2633202Domain d6pfyy_: 6pfy Y: [377775]
        Other proteins in same PDB: d6pfyc_, d6pfyd_, d6pfye_, d6pfyf_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyq_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      5. 2633203Domain d6pfyz_: 6pfy Z: [377936]
        Other proteins in same PDB: d6pfyc_, d6pfyd_, d6pfye_, d6pfyf_, d6pfyh_, d6pfyi_, d6pfyj_, d6pfyl_, d6pfym_, d6pfyn_, d6pfyo_, d6pfyp_, d6pfyq_, d6pfyr_, d6pfys_, d6pfyu_, d6pfyv_, d6pfyw_, d6pfyx_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
    2. Domain for 6tra:
    3. Domains for 6trc:
      1. 2633193Domain d6trc2_: 6trc 2: [392099]
        Other proteins in same PDB: d6trc0_, d6trc1_, d6trc3_, d6trc4_, d6trc5_, d6trc6_, d6trc7_, d6trc8_, d6trca_, d6trcc_, d6trcd_, d6trce_, d6trcf_, d6trci_, d6trcj_, d6trcl_, d6trcm_, d6trcy_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      2. 2633194Domain d6trcb_: 6trc B: [392128]
        Other proteins in same PDB: d6trc0_, d6trc1_, d6trc3_, d6trc4_, d6trc5_, d6trc6_, d6trc7_, d6trc8_, d6trca_, d6trcc_, d6trcd_, d6trce_, d6trcf_, d6trci_, d6trcj_, d6trcl_, d6trcm_, d6trcy_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
    4. Domains for 6trd:
      1. 2633195Domain d6trd1_: 6trd 1: [392032]
        Other proteins in same PDB: d6trd0_, d6trd3_, d6trd4_, d6trd5_, d6trd6_, d6trd7_, d6trd8_, d6trdc_, d6trdd_, d6trde_, d6trdf_, d6trdi_, d6trdj_, d6trdl_, d6trdm_, d6trdy_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      2. 2633196Domain d6trd2_: 6trd 2: [392031]
        Other proteins in same PDB: d6trd0_, d6trd3_, d6trd4_, d6trd5_, d6trd6_, d6trd7_, d6trd8_, d6trdc_, d6trdd_, d6trde_, d6trdf_, d6trdi_, d6trdj_, d6trdl_, d6trdm_, d6trdy_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      3. 2633197Domain d6trda_: 6trd A: [392036]
        Other proteins in same PDB: d6trd0_, d6trd3_, d6trd4_, d6trd5_, d6trd6_, d6trd7_, d6trd8_, d6trdc_, d6trdd_, d6trde_, d6trdf_, d6trdi_, d6trdj_, d6trdl_, d6trdm_, d6trdy_
        automated match to d5oy0a_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4
      4. 2633198Domain d6trdb_: 6trd B: [392170]
        Other proteins in same PDB: d6trd0_, d6trd3_, d6trd4_, d6trd5_, d6trd6_, d6trd7_, d6trd8_, d6trdc_, d6trdd_, d6trde_, d6trdf_, d6trdi_, d6trdj_, d6trdl_, d6trdm_, d6trdy_
        automated match to d5l8rb_
        complexed with bcr, ca, cl0, cla, lhg, lmg, pqn, sf4

More info for Protein automated matches from f.29.1.1: Photosystem I subunits PsaA/PsaB

Timeline for Protein automated matches from f.29.1.1: Photosystem I subunits PsaA/PsaB: