Lineage for Species: Methanocaldococcus jannaschii [TaxId: 243232]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2923316Fold c.135: NIF3 (NGG1p interacting factor 3)-like [102704] (1 superfamily)
    consist of two intertwined domains; duplication: contains two structural repeats of alpha-beta-(beta-alpha)3 motif with mixed beta-sheet, order: 1432, strand 1 is antiparallel to the rest
  4. 2923317Superfamily c.135.1: NIF3 (NGG1p interacting factor 3)-like [102705] (2 families) (S)
    di-iron binding protein
  5. 2923343Family c.135.1.0: automated matches [191472] (1 protein)
    not a true family
  6. 2923344Protein automated matches [190747] (3 species)
    not a true protein
  7. 2923345Species Methanocaldococcus jannaschii [TaxId:243232] [236411] (8 PDB entries)

PDB entries in Species: Methanocaldococcus jannaschii [TaxId: 243232]:

  1. Domain(s) for 3wsd:
    1. 2923364Domain d3wsda_: 3wsd A: [265734]
      automated match to d3wsfa_
      complexed with cl, fe
    2. 2923365Domain d3wsdb_: 3wsd B: [265735]
      automated match to d3wsfa_
      complexed with cl, fe
    3. 2923366Domain d3wsdc_: 3wsd C: [265736]
      automated match to d3wsfa_
      complexed with cl, fe
    4. 2923367Domain d3wsdd_: 3wsd D: [265737]
      automated match to d3wsfa_
      complexed with cl, fe
    5. 2923368Domain d3wsde_: 3wsd E: [265738]
      automated match to d3wsfa_
      complexed with cl, fe
    6. 2923369Domain d3wsdf_: 3wsd F: [265739]
      automated match to d3wsfa_
      complexed with cl, fe
  2. Domain(s) for 3wse:
    1. 2923373Domain d3wsea1: 3wse A:3-249 [265740]
      Other proteins in same PDB: d3wsea2
      automated match to d3wsfa_
      complexed with fe2, po4
    2. 2923374Domain d3wseb_: 3wse B: [265741]
      Other proteins in same PDB: d3wsea2
      automated match to d3wsfa_
      complexed with fe2, po4
    3. 2923375Domain d3wsec_: 3wse C: [265742]
      Other proteins in same PDB: d3wsea2
      automated match to d3wsfa_
      complexed with fe2, po4
    4. 2923376Domain d3wsed_: 3wse D: [265743]
      Other proteins in same PDB: d3wsea2
      automated match to d3wsfa_
      complexed with fe2, po4
    5. 2923377Domain d3wsee_: 3wse E: [265744]
      Other proteins in same PDB: d3wsea2
      automated match to d3wsfa_
      complexed with fe2, po4
    6. 2923378Domain d3wsef_: 3wse F: [265745]
      Other proteins in same PDB: d3wsea2
      automated match to d3wsfa_
      complexed with fe2, po4
  3. Domain(s) for 3wsf:
    1. 2923352Domain d3wsfa1: 3wsf A:3-249 [259312]
      Other proteins in same PDB: d3wsfa2
      automated match to d4iwga_
      complexed with cit, fe
    2. 2923353Domain d3wsfb_: 3wsf B: [259314]
      Other proteins in same PDB: d3wsfa2
      automated match to d4iwga_
      complexed with cit, fe
    3. 2923354Domain d3wsfc_: 3wsf C: [262444]
      Other proteins in same PDB: d3wsfa2
      automated match to d3wsfa_
      complexed with cit, fe
    4. 2923355Domain d3wsfd_: 3wsf D: [262445]
      Other proteins in same PDB: d3wsfa2
      automated match to d3wsfa_
      complexed with cit, fe
    5. 2923356Domain d3wsfe_: 3wsf E: [262446]
      Other proteins in same PDB: d3wsfa2
      automated match to d3wsfa_
      complexed with cit, fe
    6. 2923357Domain d3wsff_: 3wsf F: [262447]
      Other proteins in same PDB: d3wsfa2
      automated match to d3wsfa_
      complexed with cit, fe
  4. Domain(s) for 3wsg:
    1. 2923346Domain d3wsga1: 3wsg A:3-249 [265746]
      Other proteins in same PDB: d3wsga2
      automated match to d3wsfa_
      complexed with cit, fe2
    2. 2923347Domain d3wsgb_: 3wsg B: [265747]
      Other proteins in same PDB: d3wsga2
      automated match to d3wsfa_
      complexed with cit, fe2
    3. 2923348Domain d3wsgc_: 3wsg C: [265748]
      Other proteins in same PDB: d3wsga2
      automated match to d3wsfa_
      complexed with cit, fe2
    4. 2923349Domain d3wsgd_: 3wsg D: [265749]
      Other proteins in same PDB: d3wsga2
      automated match to d3wsfa_
      complexed with cit, fe2
    5. 2923350Domain d3wsge_: 3wsg E: [265750]
      Other proteins in same PDB: d3wsga2
      automated match to d3wsfa_
      complexed with cit, fe2
    6. 2923351Domain d3wsgf_: 3wsg F: [265751]
      Other proteins in same PDB: d3wsga2
      automated match to d3wsfa_
      complexed with cit, fe2
  5. Domain(s) for 3wsh:
    1. 2923379Domain d3wsha_: 3wsh A: [265752]
      automated match to d3wsfa_
      complexed with fe, so4
    2. 2923380Domain d3wshb_: 3wsh B: [265753]
      automated match to d3wsfa_
      complexed with fe, so4
    3. 2923381Domain d3wshc_: 3wsh C: [265754]
      automated match to d3wsfa_
      complexed with fe, so4
    4. 2923382Domain d3wshd_: 3wsh D: [265755]
      automated match to d3wsfa_
      complexed with fe, so4
    5. 2923383Domain d3wshe_: 3wsh E: [265756]
      automated match to d3wsfa_
      complexed with fe, so4
    6. 2923384Domain d3wshf_: 3wsh F: [265757]
      automated match to d3wsfa_
      complexed with fe, so4
    7. 2923385Domain d3wshg_: 3wsh G: [265758]
      automated match to d3wsfa_
      complexed with fe, so4
    8. 2923386Domain d3wshh_: 3wsh H: [265759]
      automated match to d3wsfa_
      complexed with fe, so4
    9. 2923387Domain d3wshi_: 3wsh I: [265760]
      automated match to d3wsfa_
      complexed with fe, so4
    10. 2923388Domain d3wshj_: 3wsh J: [265761]
      automated match to d3wsfa_
      complexed with fe, so4
    11. 2923389Domain d3wshk_: 3wsh K: [265762]
      automated match to d3wsfa_
      complexed with fe, so4
    12. 2923390Domain d3wshl_: 3wsh L: [265763]
      automated match to d3wsfa_
      complexed with fe, so4
  6. Domain(s) for 3wsi:
    1. 2923358Domain d3wsia1: 3wsi A:3-249 [265764]
      Other proteins in same PDB: d3wsia2
      automated match to d3wsfa_
      complexed with fe2, po4
    2. 2923359Domain d3wsib_: 3wsi B: [265765]
      Other proteins in same PDB: d3wsia2
      automated match to d3wsfa_
      complexed with fe2, po4
    3. 2923360Domain d3wsic_: 3wsi C: [265766]
      Other proteins in same PDB: d3wsia2
      automated match to d3wsfa_
      complexed with fe2, po4
    4. 2923361Domain d3wsid_: 3wsi D: [265767]
      Other proteins in same PDB: d3wsia2
      automated match to d3wsfa_
      complexed with fe2, po4
    5. 2923362Domain d3wsie_: 3wsi E: [265768]
      Other proteins in same PDB: d3wsia2
      automated match to d3wsfa_
      complexed with fe2, po4
    6. 2923363Domain d3wsif_: 3wsi F: [265769]
      Other proteins in same PDB: d3wsia2
      automated match to d3wsfa_
      complexed with fe2, po4
  7. Domain(s) for 4iwg:
    1. 2923370Domain d4iwga_: 4iwg A: [236412]
      automated match to d2yyba_
    2. 2923371Domain d4iwgb_: 4iwg B: [240270]
      automated match to d4iwga_
    3. 2923372Domain d4iwgc_: 4iwg C: [240271]
      automated match to d4iwga_
  8. Domain(s) for 4iwm:
    1. 2923391Domain d4iwma_: 4iwm A: [252738]
      automated match to d4iwga_
    2. 2923392Domain d4iwmb_: 4iwm B: [252739]
      automated match to d4iwga_
    3. 2923393Domain d4iwmc_: 4iwm C: [252740]
      automated match to d4iwga_
    4. 2923394Domain d4iwmd_: 4iwm D: [252741]
      automated match to d4iwga_
    5. 2923395Domain d4iwme_: 4iwm E: [252742]
      automated match to d4iwga_
    6. 2923396Domain d4iwmf_: 4iwm F: [252743]
      automated match to d4iwga_

More info for Species Methanocaldococcus jannaschii [TaxId:243232] from c.135.1.0 automated matches

Timeline for Species Methanocaldococcus jannaschii [TaxId:243232] from c.135.1.0 automated matches: