SCOPe 2.06: Domain d4l1ia1: 4l1i A:2-229

Lineage for d4l1ia1 (4l1i A:2-229)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.22: GFP-like [54510] (1 superfamily)
   beta-sheet folds into a barrel (n=11, S=14) around the central helix

4. Superfamily d.22.1: GFP-like [54511] (3 families)

5. Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)

6. Protein Green fluorescent protein, GFP [54513] (4 species)

7. Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (177 PDB entries)
   Uniprot P42212

8. Domain d4l1ia1: 4l1i A:2-229 [235885]
   Other proteins in same PDB: d4l1ia2
   automated match to d4l12a_
   complexed with ca

Details for d4l1ia1

PDB Entry: 4l1i, 1.2 Å

PDB Description: Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca

PDB Compounds: (A:) EGFP-based Calcium Sensor CatchER

SCOPe Domain Sequences for d4l1ia1:

Sequence; same for both SEQRES and ATOM records:

>d4l1ia1 d.22.1.1 (A:2-229) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
skgeelftgvvpilveldgdvnghkfsvsgegegdatygkltlkficttgklpvpwptlv
ttlgygvqcfsrypdhmkqhdffksampegyvqertiffkddgnyktraevkfegdtlvn
rielkgidfkedgnilghkleynynehnvyitadkqkngikanfkirhniedgsvqladh
yqqntpigdgpvllpdnhyldtesalskdpnekrdhmvlleeveaagi

Timeline for d4l1ia1:

• d4l1ia1 first appeared in SCOPe 2.03, called d4l1ia_
  
• d4l1ia1 was called d4l1ia_ in SCOPe 2.05
  
• d4l1ia1 appears in SCOPe 2.07
  
• d4l1ia1 appears in the current release, SCOPe 2.08