Lineage for d1tmf3_ (1tmf 3:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410109Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2410385Protein Theilovirus capsid proteins [49686] (1 species)
  7. 2410386Species Theiler's murine encephalomyelitis virus, strain da [TaxId:12124] [49687] (2 PDB entries)
  8. 2410392Domain d1tmf3_: 1tmf 3: [23578]

Details for d1tmf3_

PDB Entry: 1tmf (more details), 3.5 Å

PDB Description: three-dimensional structure of theiler murine encephalomyelitis virus (bean strain)
PDB Compounds: (3:) theiler's murine encephalomyelitis virus (subunit vp3)

SCOPe Domain Sequences for d1tmf3_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1tmf3_ b.121.4.1 (3:) Theilovirus capsid proteins {Theiler's murine encephalomyelitis virus, strain da [TaxId: 12124]}

SCOPe Domain Coordinates for d1tmf3_:

Click to download the PDB-style file with coordinates for d1tmf3_.
(The format of our PDB-style files is described here.)

Timeline for d1tmf3_: