SCOPe 2.06: Domain d4n2yd_: 4n2y D:

Lineage for d4n2yd_ (4n2y D:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.0: automated matches [191350] (1 protein)
   not a true family

6. Protein automated matches [190292] (34 species)
   not a true protein

7. Species Archaeoglobus fulgidus [TaxId:2234] [228125] (2 PDB entries)

8. Domain d4n2yd_: 4n2y D: [235721]
   automated match to d4muza_
   complexed with gol

Details for d4n2yd_

PDB Entry: 4n2y, 1.55 Å

PDB Description: Crystal structure of orotidine 5'-monophosphate decarboxylase from Archaeoglobus fulgidus

PDB Compounds: (D:) orotidine 5'-phosphate decarboxylase

SCOPe Domain Sequences for d4n2yd_:

Sequence, based on SEQRES records:

>d4n2yd_ c.1.2.0 (D:) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
mkqlilaldvmdgekameiakkvaehvdrikvnyplvlsagvgimkrlseikpviadfki
advpytssliariafensaesvivhgfvgsdtlrevcrvaeefggkvyavtelsspggee
fmsavslkivekakeagchgliapstrierlreirkaagdmeilcpgigaqkgsieavky
adgiivgrgiyasgnpaeearklrrvlki

Sequence, based on observed residues (ATOM records):

>d4n2yd_ c.1.2.0 (D:) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
mkqlilaldvmdgekameiakkvaehvdrikvnyplvlsagvgimkrlseikpviadfki
advpytssliariafensaesvivhgfvgsdtlrevcrvaeefggkvyavtelsspggee
fmsavslkivekakeagchgliapstrierlreirkaagdmeilcpsieavkyadgiivg
rgiyasgnpaeearklrrvlki

Timeline for d4n2yd_:

• d4n2yd_ first appeared in SCOPe 2.03
  
• d4n2yd_ appears in SCOPe 2.05
  
• d4n2yd_ appears in SCOPe 2.07
  
• d4n2yd_ appears in the current release, SCOPe 2.08