SCOPe 2.05: Domain d1cov1_: 1cov 1:

Lineage for d1cov1_ (1cov 1:)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

6. Protein Human enterovirus B coat proteins [88635] (4 species)

7. Species Human coxsackievirus B3 [TaxId:12072] [49681] (2 PDB entries)

8. Domain d1cov1_: 1cov 1: [23564]
   complexed with myr, plm

Details for d1cov1_

PDB Entry: 1cov, 3.5 Å

PDB Description: coxsackievirus b3 coat protein

PDB Compounds: (1:) coxsackievirus coat protein

SCOPe Domain Sequences for d1cov1_:

Sequence; same for both SEQRES and ATOM records:

>d1cov1_ b.121.4.1 (1:) Human enterovirus B coat proteins {Human coxsackievirus B3 [TaxId: 12072]}
rvadtvgtgptnseaipaltaaetghtsqvvpsdtmqtrhvknyhsrsestienflcrsa
cvyfteyensgakryaewvitprqaaqlrrklefftyvrfdleltfvitstqqpsttqnq
daqilthqimyvppggpvpdkvdsyvwqtstnpsvfwtegnapprmsvpflsignaysnf
ydgwsefsrngvygintlnnmgtlyarhvnagstgpikstiriyfkpkhvkawiprpprl
cqyekaknvnfqpsgvtttrqsittmtnt

Timeline for d1cov1_:

• d1cov1_ first appeared (with stable ids) in SCOP 1.55
  
• d1cov1_ appears in SCOPe 2.04
  
• d1cov1_ appears in SCOPe 2.06
  
• d1cov1_ appears in the current release, SCOPe 2.08