Lineage for d4m56b1 (4m56 B:3-482)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2830345Protein automated matches [190099] (31 species)
    not a true protein
  7. 2830357Species Bacillus subtilis [TaxId:224308] [228099] (5 PDB entries)
  8. 2830364Domain d4m56b1: 4m56 B:3-482 [235529]
    Other proteins in same PDB: d4m56a2, d4m56b2
    automated match to d4m56a1
    complexed with glo, gol, so4

Details for d4m56b1

PDB Entry: 4m56 (more details), 2.3 Å

PDB Description: the structure of wild-type mall from bacillus subtilis
PDB Compounds: (B:) Oligo-1,6-glucosidase 1

SCOPe Domain Sequences for d4m56b1:

Sequence, based on SEQRES records: (download)

>d4m56b1 c.1.8.1 (B:3-482) automated matches {Bacillus subtilis [TaxId: 224308]}
ewwkeavvyqiyprsfydangdgfgdlqgviqkldyiknlgadviwlspvfdspqddngy
disdyknmyekfgtnedmfqlidevhkrgmkivmdlvvnhtsdehawfaesrkskdnpyr
dyylwkdpkpdgsepnnwgsifsgsawtydegtgqyylhyfskkqpdlnweneavrrevy
dvmrfwmdrgvdgwrmdvigsiskytdfpdyetdhsrsyivgryhsngprlhefiqemnr
evlshydcmtvgeangsdieeakkytdasrqelnmiftfehmdidkeqnspngkwqikpf
dlialkktmtrwqtglmnvgwntlyfenhdqprvisrwgndrklrkecakafatvlhgmk
gtpfiyqgeeigmvnsdmplemyddleiknayrelvvenktmsekefvkavmikgrdhar
tpmqwdagkhagftagdpwipvnsryqdinvkesledqdsiffyyqkliqlrkqykimiy

Sequence, based on observed residues (ATOM records): (download)

>d4m56b1 c.1.8.1 (B:3-482) automated matches {Bacillus subtilis [TaxId: 224308]}
ewwkeavvyqiyprsfydangdgfgdlqgviqkldyiknlgadviwlspvfdspqddngy
disdyknmyekfgtnedmfqlidevhkrgmkivmdlvvnhtsdehawfaesrkskdnpyr
dyylwkdpkpdgsepnnwgsifsgsawtydegtgqyylhyfskkqpdlnweneavrrevy
dvmrfwmdrgvdgwrmdvigsiskytdfpdyetrsyivgryhsngprlhefiqemnrevl
shydcmtvgeangsdieeakkytdasrqelnmiftfehmdidkeqnspngkwqikpfdli
alkktmtrwqtglmnvgwntlyfenhdqprvisrwgndrklrkecakafatvlhgmkgtp
fiyqgeeigmvnsdmplemyddleiknayrelvvenktmsekefvkavmikgrdhartpm
qwdagkhagftagdpwipvnsryqdinvkesledqdsiffyyqkliqlrkqykimiy

SCOPe Domain Coordinates for d4m56b1:

Click to download the PDB-style file with coordinates for d4m56b1.
(The format of our PDB-style files is described here.)

Timeline for d4m56b1:

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Domains from same chain:
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d4m56b2