Lineage for d4kc2a1 (4kc2 A:64-346)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2898275Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2898276Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2898744Family c.68.1.9: alpha-1,3-galactosyltransferase-like [64131] (4 proteins)
    automatically mapped to Pfam PF03414
  6. 2898880Protein automated matches [190178] (2 species)
    not a true protein
  7. 2898887Species Human (Homo sapiens) [TaxId:9606] [186910] (75 PDB entries)
  8. 2898953Domain d4kc2a1: 4kc2 A:64-346 [235140]
    Other proteins in same PDB: d4kc2a2
    automated match to d4kc1a_
    complexed with bhe, mn, ws2

Details for d4kc2a1

PDB Entry: 4kc2 (more details), 1.7 Å

PDB Description: structure of the blood group glycosyltransferase aaglyb in complex with a pyridine inhibitor as a neutral pyrophosphate surrogate
PDB Compounds: (A:) Fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase soluble form

SCOPe Domain Sequences for d4kc2a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4kc2a1 c.68.1.9 (A:64-346) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vslprmvypqpkvltpcrkdvlvvtpwlapivwegtfnidilneqfrlqnttigltvfai
kkyvaflklfletaekhfmvghrvhyyvftdqpaavprvtlgtgrqlsvlevraykrwqd
vsmrrmemisdfcerrflsevdylvcvdvdmefrdhvgveiltplfgtlhpgfygssrea
ftyerrpqsqayipkdegdfyyggaffggsvqevqrltrachqammvdqangieavwhde
shlnkyllrhkptkvlspeylwdqqllgwpavlrklrftavpk

SCOPe Domain Coordinates for d4kc2a1:

Click to download the PDB-style file with coordinates for d4kc2a1.
(The format of our PDB-style files is described here.)

Timeline for d4kc2a1:

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Domains from same chain:
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d4kc2a2