Lineage for d4jakb1 (4jak B:2-154)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150317Family c.116.1.0: automated matches [191557] (1 protein)
    not a true family
  6. 2150318Protein automated matches [190961] (16 species)
    not a true protein
  7. 2150350Species Escherichia coli K-12 [TaxId:83333] [234948] (2 PDB entries)
  8. 2150352Domain d4jakb1: 4jak B:2-154 [234950]
    Other proteins in same PDB: d4jaka2, d4jakb2
    automated match to d4kgnd_

Details for d4jakb1

PDB Entry: 4jak (more details), 2 Å

PDB Description: Crystal structure of tRNA (Um34/Cm34) methyltransferase TrmL from Escherichia coli
PDB Compounds: (B:) tRNA (cytidine(34)-2'-O)-methyltransferase

SCOPe Domain Sequences for d4jakb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4jakb1 c.116.1.0 (B:2-154) automated matches {Escherichia coli K-12 [TaxId: 83333]}

SCOPe Domain Coordinates for d4jakb1:

Click to download the PDB-style file with coordinates for d4jakb1.
(The format of our PDB-style files is described here.)

Timeline for d4jakb1:

View in 3D
Domains from same chain:
(mouse over for more information)