SCOPe 2.08: Domain d4gada1: 4gad A:1-251

Lineage for d4gada1 (4gad A:1-251)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.106: SurE-like [64166] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 9 strands, order 342156798; strands 3, 8 and 9 are antiparallel to the rest; left-handed crossover connection between strands 6 and 7

4. Superfamily c.106.1: SurE-like [64167] (2 families)
   some topological similarity to the N-terminal domain of Glutaminase/Asparaginase family

5. Family c.106.1.0: automated matches [191430] (1 protein)
   not a true family

6. Protein automated matches [190619] (7 species)
   not a true protein

7. Species Salmonella typhimurium [TaxId:99287] [196119] (10 PDB entries)

8. Domain d4gada1: 4gad A:1-251 [234457]
   Other proteins in same PDB: d4gada2
   automated match to d2v4na_
   complexed with gol, mg; mutant

Details for d4gada1

PDB Entry: 4gad, 2.35 Å

PDB Description: Crystal Structure of D230A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

PDB Compounds: (A:) 5'/3'-nucleotidase SurE

SCOPe Domain Sequences for d4gada1:

Sequence, based on SEQRES records:

>d4gada1 c.106.1.0 (A:1-251) automated matches {Salmonella typhimurium [TaxId: 99287]}
mrillsnddgvhapgiqtlakalrefadvqvvapdrnrsgasnsltlesslrtftfdngd
iavqmgtptdcvylgvnalmrprpdivvsginagpnlgddviysgtvaaamegrhlgfpa
lavslngyqhydtaaavtcallrglsreplrtgrilnvnvpdlplaqvkgirvtrcgsrh
padkvipqedprgntlywigppgdkydagpdtdfaavdegyvsvtplhvaltaasahdvv
sdwldsvgvgt

Sequence, based on observed residues (ATOM records):

>d4gada1 c.106.1.0 (A:1-251) automated matches {Salmonella typhimurium [TaxId: 99287]}
mrillsnddgvhapgiqtlakalrefadvqvvapdrnrsgasnsltlesslrtftfdngd
iavqmgtptdcvylgvnalmrprpdivvsginagpnlgddviysgtvaaamegrhlgfpa
lavslngyqhydtaaavtcallrglsreplrtgrilnvnvpdlplaqvkgirvtrcgsrh
adkvipqedprgntlywiggpdtdfaavdegyvsvtplhvaltaasahdvvsdwldsvgv
gt

Timeline for d4gada1:

• d4gada1 first appeared in SCOPe 2.03, called d4gada_
  
• d4gada1 appears in SCOPe 2.07