SCOPe 2.08: Domain d4dz6a1: 4dz6 A:3-169

Lineage for d4dz6a1 (4dz6 A:3-169)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families)

5. Family d.58.6.0: automated matches [191597] (1 protein)
   not a true family

6. Protein automated matches [191087] (19 species)
   not a true protein

7. Species Lyme disease spirochete (Borrelia burgdorferi) [TaxId:139] [226296] (2 PDB entries)

8. Domain d4dz6a1: 4dz6 A:3-169 [234345]
   Other proteins in same PDB: d4dz6a2, d4dz6b2, d4dz6c2, d4dz6d2, d4dz6e2, d4dz6f2
   automated match to d4di6d_
   complexed with adp, edo, vn4, vo4

Details for d4dz6a1

PDB Entry: 4dz6, 2.2 Å

PDB Description: transition state mimic of nucleoside-diphosphate kinase from borrelia burgdorferi with bound vanadate and adp

PDB Compounds: (A:) Nucleoside diphosphate kinase

SCOPe Domain Sequences for d4dz6a1:

Sequence; same for both SEQRES and ATOM records:

>d4dz6a1 d.58.6.0 (A:3-169) automated matches {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
mllqktlcivkpdgvrrgligdvvsrfervglkmvaakmlivdeslakkhylyddivfrh
seavwnslikfisnspvftfvvegvesievvrklcgatepklaipgtirgdfsyhsfkys
nekgfsiynvihasaneadamreipiwfkdneilnykrddecehyyc

Timeline for d4dz6a1:

• d4dz6a1 first appeared in SCOPe 2.03, called d4dz6a_
  
• d4dz6a1 appears in SCOPe 2.07