SCOPe 2.07: Domain d4a1jb1: 4a1j B:1-48

Lineage for d4a1jb1 (4a1j B:1-48)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.7: LysM domain [54105] (1 superfamily)
   beta-alpha(2)-beta; antiparallel strands

4. Superfamily d.7.1: LysM domain [54106] (2 families)
   automatically mapped to Pfam PF01476

5. Family d.7.1.0: automated matches [234000] (1 protein)
   not a true family

6. Protein automated matches [234001] (6 species)
   not a true protein

7. Species Bacillus subtilis [TaxId:1423] [234002] (3 PDB entries)

8. Domain d4a1jb1: 4a1j B:1-48 [234025]
   Other proteins in same PDB: d4a1ja2, d4a1ja3, d4a1jb2, d4a1jb3
   automated match to d1y7ma2
   complexed with so4

Details for d4a1jb1

PDB Entry: 4a1j, 2.2 Å

PDB Description: Ykud L,D-transpeptidase from b.subtilis

PDB Compounds: (B:) putative l, d-transpeptidase ykud

SCOPe Domain Sequences for d4a1jb1:

Sequence; same for both SEQRES and ATOM records:

>d4a1jb1 d.7.1.0 (B:1-48) automated matches {Bacillus subtilis [TaxId: 1423]}
mltyqvkqgdtlnsiaadfristaallqanpslqagltagqsivipgl

Timeline for d4a1jb1:

• d4a1jb1 first appeared in SCOPe 2.03
  
• d4a1jb1 appears in SCOPe 2.06
  
• d4a1jb1 appears in the current release, SCOPe 2.08