Class b: All beta proteins [48724] (180 folds) |
Fold b.160: L,D-transpeptidase catalytic domain-like [141522] (1 superfamily) barrel, closed; n=8, S=10; one overside connection |
Superfamily b.160.1: L,D-transpeptidase catalytic domain-like [141523] (1 family) automatically mapped to Pfam PF03734 |
Family b.160.1.1: L,D-transpeptidase catalytic domain-like [141524] (3 proteins) Pfam PF03734; ErfK/YbiS/YcfS/YnhG |
Protein automated matches [234004] (6 species) not a true protein |
Bacillus subtilis [TaxId:1423] [234005] (3 PDB entries) |
Domain d4a1ia2: 4a1i A:49-164 [234006] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1ib2: 4a1i B:49-164 [234008] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1ic2: 4a1i C:49-164 [234020] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1id2: 4a1i D:49-164 [234022] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1ie2: 4a1i E:49-164 [234013] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1if2: 4a1i F:49-164 [234010] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1ig2: 4a1i G:49-164 [234014] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1ih2: 4a1i H:49-164 [234018] Other proteins in same PDB: d4a1ia1, d4a1ia3, d4a1ib1, d4a1ib3, d4a1ic1, d4a1ic3, d4a1id1, d4a1id3, d4a1ie1, d4a1if1, d4a1ig1, d4a1ih1 automated match to d1y7ma1 complexed with cd, cl, so4 |
Domain d4a1ka2: 4a1k A:49-164 [234024] Other proteins in same PDB: d4a1ka1, d4a1ka3 automated match to d1y7ma1 complexed with so4 |
Bacillus subtilis [TaxId:224308] [256166] (2 PDB entries) |
Enterococcus faecium [TaxId:1352] [363176] (1 PDB entry) |
Domain d6fj1a2: 6fj1 A:341-466 [363177] Other proteins in same PDB: d6fj1a1, d6fj1a3, d6fj1a4, d6fj1b1, d6fj1b3, d6fj1b4, d6fj1c1, d6fj1c3, d6fj1c4 automated match to d1zata1 complexed with cl, gol, nxl, p3g |
Domain d6fj1b2: 6fj1 B:341-466 [363303] Other proteins in same PDB: d6fj1a1, d6fj1a3, d6fj1a4, d6fj1b1, d6fj1b3, d6fj1b4, d6fj1c1, d6fj1c3, d6fj1c4 automated match to d1zata1 complexed with cl, gol, nxl, p3g |
Domain d6fj1c2: 6fj1 C:341-466 [363323] Other proteins in same PDB: d6fj1a1, d6fj1a3, d6fj1a4, d6fj1b1, d6fj1b3, d6fj1b4, d6fj1c1, d6fj1c3, d6fj1c4 automated match to d1zata1 complexed with cl, gol, nxl, p3g |
Mycobacterium tuberculosis [TaxId:1773] [419883] (5 PDB entries) |
Domain d3vyoa2: 3vyo A:252-408 [413505] Other proteins in same PDB: d3vyoa1, d3vyob1 automated match to d3tura2 mutant |
Domain d3vyob2: 3vyo B:252-408 [413507] Other proteins in same PDB: d3vyoa1, d3vyob1 automated match to d3tura2 mutant |
Domain d3vypa2: 3vyp A:252-408 [413509] Other proteins in same PDB: d3vypa1, d3vypb1 automated match to d3tura2 complexed with gol, mxr |
Domain d3vypb2: 3vyp B:252-405 [413511] Other proteins in same PDB: d3vypa1, d3vypb1 automated match to d3tura2 complexed with gol, mxr |
Domain d4gsqa2: 4gsq A:252-408 [413802] Other proteins in same PDB: d4gsqa1 automated match to d3tura2 complexed with ca, gol |
Domain d4gsra2: 4gsr A:252-408 [413804] Other proteins in same PDB: d4gsra1 automated match to d3tura2 complexed with emt, gol |
Domain d4gsua2: 4gsu A:252-408 [413806] Other proteins in same PDB: d4gsua1, d4gsub1 automated match to d3tura2 complexed with dwz |
Domain d4gsub2: 4gsu B:252-408 [413808] Other proteins in same PDB: d4gsua1, d4gsub1 automated match to d3tura2 complexed with dwz |
Mycobacterium tuberculosis [TaxId:83331] [419974] (1 PDB entry) |
Domain d5lbga2: 5lbg A:252-408 [415014] Other proteins in same PDB: d5lbga1, d5lbgb1 automated match to d3tura2 complexed with 3hl |
Domain d5lbgb2: 5lbg B:252-408 [415016] Other proteins in same PDB: d5lbga1, d5lbgb1 automated match to d3tura2 complexed with 3hl |
Mycobacterium tuberculosis [TaxId:83332] [419972] (10 PDB entries) |
Domain d5lb1a2: 5lb1 A:252-407 [415009] Other proteins in same PDB: d5lb1a1, d5lb1b1, d5lb1b3 automated match to d3tura2 complexed with mnb |
Domain d5lb1b2: 5lb1 B:252-407 [415011] Other proteins in same PDB: d5lb1a1, d5lb1b1, d5lb1b3 automated match to d3tura2 complexed with mnb |
Domain d6iyva2: 6iyv A:252-407 [416185] Other proteins in same PDB: d6iyva1, d6iyvb1 automated match to d3tura2 complexed with 2rg, gol, peg, so4, trs |
Domain d6iyvb2: 6iyv B:252-405 [416187] Other proteins in same PDB: d6iyva1, d6iyvb1 automated match to d3tura2 complexed with 2rg, gol, peg, so4, trs |
Domain d6iywa2: 6iyw A:252-406 [416189] Other proteins in same PDB: d6iywa1, d6iywb1, d6iywc1, d6iywd1, d6iywe1, d6iywf1 automated match to d3tura2 complexed with gol, im2 |
Domain d6iywb2: 6iyw B:252-406 [416191] Other proteins in same PDB: d6iywa1, d6iywb1, d6iywc1, d6iywd1, d6iywe1, d6iywf1 automated match to d3tura2 complexed with gol, im2 |
Domain d6iywc2: 6iyw C:252-407 [416193] Other proteins in same PDB: d6iywa1, d6iywb1, d6iywc1, d6iywd1, d6iywe1, d6iywf1 automated match to d3tura2 complexed with gol, im2 |
Domain d6iywd2: 6iyw D:252-405 [416195] Other proteins in same PDB: d6iywa1, d6iywb1, d6iywc1, d6iywd1, d6iywe1, d6iywf1 automated match to d3tura2 complexed with gol, im2 |
Domain d6iywe2: 6iyw E:252-405 [416197] Other proteins in same PDB: d6iywa1, d6iywb1, d6iywc1, d6iywd1, d6iywe1, d6iywf1 automated match to d3tura2 complexed with gol, im2 |
Domain d6iywf2: 6iyw F:252-405 [416199] Other proteins in same PDB: d6iywa1, d6iywb1, d6iywc1, d6iywd1, d6iywe1, d6iywf1 automated match to d3tura2 complexed with gol, im2 |
Domain d6lqba2: 6lqb A:252-407 [416341] Other proteins in same PDB: d6lqba1, d6lqbb1 automated match to d3tura2 complexed with 2rg, acy, gol |
Domain d6lqbb2: 6lqb B:252-405 [416343] Other proteins in same PDB: d6lqba1, d6lqbb1 automated match to d3tura2 complexed with 2rg, acy, gol |
Domain d7a0za2: 7a0z A:252-408 [417504] Other proteins in same PDB: d7a0za1, d7a0zb1 automated match to d3tura2 complexed with bt6, tam |
Domain d7a0zb2: 7a0z B:252-408 [417506] Other proteins in same PDB: d7a0za1, d7a0zb1 automated match to d3tura2 complexed with bt6, tam |
Domain d7a10a2: 7a10 A:252-408 [417508] Other proteins in same PDB: d7a10a1, d7a10b1 automated match to d3tura2 complexed with qu5 |
Domain d7a10b2: 7a10 B:252-407 [417510] Other proteins in same PDB: d7a10a1, d7a10b1 automated match to d3tura2 complexed with qu5 |
Domain d7a11a2: 7a11 A:252-408 [417512] Other proteins in same PDB: d7a11a1, d7a11b1 automated match to d3tura2 complexed with act, xl3 |
Domain d7a11b2: 7a11 B:252-408 [417514] Other proteins in same PDB: d7a11a1, d7a11b1 automated match to d3tura2 complexed with act, xl3 |
Domain d7a1ca2: 7a1c A:252-408 [417516] Other proteins in same PDB: d7a1ca1, d7a1cb1 automated match to d3tura2 complexed with dms |
Domain d7a1cb2: 7a1c B:252-408 [417518] Other proteins in same PDB: d7a1ca1, d7a1cb1 automated match to d3tura2 complexed with dms |
Domain d7a1ea2: 7a1e A:252-408 [417520] Other proteins in same PDB: d7a1ea1, d7a1eb1 automated match to d3tura2 complexed with act, sdq |
Domain d7a1eb2: 7a1e B:252-408 [417522] Other proteins in same PDB: d7a1ea1, d7a1eb1 automated match to d3tura2 complexed with act, sdq |
Domain d7kema2: 7kem A:252-407 [418217] Other proteins in same PDB: d7kema1 automated match to d3tura2 complexed with 0jc, 6cl, dgl, pt |
Timeline for Protein automated matches from b.160.1.1: L,D-transpeptidase catalytic domain-like: