SCOPe 2.06: Domain d1c8ha_: 1c8h A:

Lineage for d1c8ha_ (1c8h A:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.5: ssDNA viruses [88645] (3 families)

5. Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins)
   automatically mapped to Pfam PF00740

6. Protein Parvovirus (panleukopenia virus) capsid protein [49661] (6 species)

7. Species Canine parvovirus [TaxId:10788] [49662] (7 PDB entries)

8. Domain d1c8ha_: 1c8h A: [23378]
   complexed with ca

Details for d1c8ha_

PDB Entry: 1c8h, 3.5 Å

PDB Description: canine parvovirus strain d empty capsid structure at ph 5.5

PDB Compounds: (A:) canine parvovirus capsid

SCOPe Domain Sequences for d1c8ha_:

Sequence, based on SEQRES records:

>d1c8ha_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Canine parvovirus [TaxId: 10788]}
gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavngnm
alddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvses
atqpptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdr
tlipshtgtsgtptniyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlt
htwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaev
gysapyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetpe
rftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygplta
lnnvppvypngqiwdkefdtdlkprlhvnapfvcqnncpgqlfvkvapnltneydpdasa
nmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeks
qlaprkly

Sequence, based on observed residues (ATOM records):

>d1c8ha_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Canine parvovirus [TaxId: 10788]}
gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavngnm
alddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvsep
ptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdrtlip
shtgtsgtptniyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlthtwq
tnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysa
pyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetperfty
iahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygpltalnnv
ppvypngqiwdkefdtdlkprlhvnapfvcqnncpgqlfvkvapnltneydpdasanmsr
ivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlap
rkly

Timeline for d1c8ha_:

• d1c8ha_ first appeared (with stable ids) in SCOP 1.55
  
• d1c8ha_ appears in SCOPe 2.05
  
• d1c8ha_ appears in SCOPe 2.07
  
• d1c8ha_ appears in the current release, SCOPe 2.08