SCOPe 2.08: Domain d3sq5c2: 3sq5 C:294-538

Lineage for d3sq5c2 (3sq5 C:294-538)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.136: Phospholipase D/nuclease [56023] (1 superfamily)
   beta-alpha-beta-alpha-beta-alpha-beta(4)-alpha; mixed sheet: order 1765234

4. Superfamily d.136.1: Phospholipase D/nuclease [56024] (6 families)

5. Family d.136.1.3: Tyrosyl-DNA phosphodiesterase TDP1 [69815] (2 proteins)

6. Protein automated matches [233597] (1 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233598] (4 PDB entries)

8. Domain d3sq5c2: 3sq5 C:294-538 [233603]
   automated match to d1q32a2
   mutant

Details for d3sq5c2

PDB Entry: 3sq5, 2.3 Å

PDB Description: Crystal Structure Analysis of the Yeast Tyrosyl-DNA Phosphodiesterase H432N Mutant

PDB Compounds: (C:) tyrosyl-DNA phosphodiesterase 1

SCOPe Domain Sequences for d3sq5c2:

Sequence, based on SEQRES records:

>d3sq5c2 d.136.1.3 (C:294-538) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
sagtsasdtakhylcqtssigtslsrardenlwthlmiplftgimsppakdtagrkkaei
lptnslineysqrkikpyiifpteqefvtsplkwsssgwfhfqylqkksyyemlrnkfkv
fykqdpamvtrrrgttpanskfymhcatnsagpcdasqvfkelewclytsanlsqtawgt
vsrkprnyeagvlyhsrrlantrkvtcrtftrdrrgcagnpthvavpftlpvipydlaed
ecfcl

Sequence, based on observed residues (ATOM records):

>d3sq5c2 d.136.1.3 (C:294-538) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
sdtakhylcqtssigtslsrardenlwthlmiplftgimsppilptnslineysqrkikp
yiifpteqefvtsplkwsssgwfhfqylqkksyyemlrnkfkvfykqdpamvtrrrgttp
anskfymhcatnsqvfkelewclytsanlsqtawgtvsrkprnyeagvlyhsrrlantrk
vtcrtftrdpthvavpftlpvipydlaedecfcl

Timeline for d3sq5c2:

• d3sq5c2 first appeared in SCOPe 2.03
  
• d3sq5c2 appears in SCOPe 2.07