Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.136: Phospholipase D/nuclease [56023] (1 superfamily)
    beta-alpha-beta-alpha-beta-alpha-beta(4)-alpha; mixed sheet: order 1765234
  4. Superfamily d.136.1: Phospholipase D/nuclease [56024] (6 families) (S)
  5. Family d.136.1.3: Tyrosyl-DNA phosphodiesterase TDP1 [69815] (2 proteins)
  6. Protein automated matches [233597] (1 species)
    not a true protein
  7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233598] (4 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]:

  1. Domain(s) for 3sq3:
    1. Domain d3sq3a1: 3sq3 A:79-293 [233599]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d1q32a1
      mutant
    2. Domain d3sq3a2: 3sq3 A:294-539 [233600]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d1q32a2
      mutant
    3. Domain d3sq3b1: 3sq3 B:79-293 [239733]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d3sq3a1
      mutant
    4. Domain d3sq3b2: 3sq3 B:294-539 [239734]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d3sq3a2
      mutant
    5. Domain d3sq3c1: 3sq3 C:79-293 [239735]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d3sq3a1
      mutant
    6. Domain d3sq3c2: 3sq3 C:294-538 [239736]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d3sq3a2
      mutant
    7. Domain d3sq3d1: 3sq3 D:79-293 [239737]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d3sq3a1
      mutant
    8. Domain d3sq3d2: 3sq3 D:294-539 [239738]
      Other proteins in same PDB: d3sq3a3, d3sq3d3
      automated match to d3sq3a2
      mutant
  2. Domain(s) for 3sq5:
    1. Domain d3sq5a1: 3sq5 A:79-293 [233601]
      automated match to d1q32a1
      mutant
    2. Domain d3sq5a2: 3sq5 A:294-538 [233604]
      automated match to d1q32a2
      mutant
    3. Domain d3sq5b1: 3sq5 B:79-293 [233605]
      automated match to d1q32a1
      mutant
    4. Domain d3sq5b2: 3sq5 B:294-538 [233606]
      automated match to d1q32a2
      mutant
    5. Domain d3sq5c1: 3sq5 C:79-293 [233602]
      automated match to d1q32a1
      mutant
    6. Domain d3sq5c2: 3sq5 C:294-538 [233603]
      automated match to d1q32a2
      mutant
    7. Domain d3sq5d1: 3sq5 D:79-293 [239739]
      automated match to d3sq5c1
      mutant
    8. Domain d3sq5d2: 3sq5 D:294-538 [239740]
      automated match to d3sq5c2
      mutant
  3. Domain(s) for 3sq7:
    1. Domain d3sq7a1: 3sq7 A:79-293 [233607]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d1q32a1
      complexed with so4; mutant
    2. Domain d3sq7a2: 3sq7 A:294-539 [233608]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d1q32a2
      complexed with so4; mutant
    3. Domain d3sq7b1: 3sq7 B:79-293 [239741]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d3sq7a1
      complexed with so4; mutant
    4. Domain d3sq7b2: 3sq7 B:294-539 [239742]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d3sq7a2
      complexed with so4; mutant
    5. Domain d3sq7c1: 3sq7 C:79-293 [239743]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d3sq7a1
      complexed with so4; mutant
    6. Domain d3sq7c2: 3sq7 C:294-539 [239744]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d3sq7a2
      complexed with so4; mutant
    7. Domain d3sq7d1: 3sq7 D:79-293 [239745]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d3sq7a1
      complexed with so4; mutant
    8. Domain d3sq7d2: 3sq7 D:294-539 [239746]
      Other proteins in same PDB: d3sq7a3, d3sq7b3, d3sq7c3, d3sq7d3
      automated match to d3sq7a2
      complexed with so4; mutant
  4. Domain(s) for 3sq8:
    1. Domain d3sq8a1: 3sq8 A:79-293 [233609]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d1q32a1
      mutant
    2. Domain d3sq8a2: 3sq8 A:294-539 [233610]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d1q32a2
      mutant
    3. Domain d3sq8b1: 3sq8 B:79-293 [233611]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d1q32a1
      mutant
    4. Domain d3sq8b2: 3sq8 B:294-539 [233612]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d1q32a2
      mutant
    5. Domain d3sq8c1: 3sq8 C:79-293 [239747]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d3sq8b1
      mutant
    6. Domain d3sq8c2: 3sq8 C:294-539 [239748]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d3sq8b2
      mutant
    7. Domain d3sq8d1: 3sq8 D:79-293 [239749]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d3sq8b1
      mutant
    8. Domain d3sq8d2: 3sq8 D:294-539 [239750]
      Other proteins in same PDB: d3sq8b3, d3sq8c3, d3sq8d3
      automated match to d3sq8b2
      mutant

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] from d.136.1.3 automated matches

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] from d.136.1.3 automated matches: