Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2052889Superfamily b.40.16: HIN-2000 domain-like [159141] (2 families) (S)
    duplication: tandem repeat of two OB-fold domains
  5. 2052921Family b.40.16.0: automated matches [233467] (1 protein)
    not a true family
  6. 2052922Protein automated matches [233468] (2 species)
    not a true protein

Species:

  1. 2052923Human (Homo sapiens) [TaxId:9606] [233469] (2 PDB entries)
    1. Domains for 3rn2:
      1. 2052924Domain d3rn2a1: 3rn2 A:147-249 [233470]
        automated match to d2oq0d2
        protein/DNA complex; complexed with edo
      2. 2052925Domain d3rn2a2: 3rn2 A:250-340 [233471]
        automated match to d2oq0a1
        protein/DNA complex; complexed with edo
      3. 2052926Domain d3rn2b1: 3rn2 B:147-249 [233472]
        automated match to d2oq0d2
        protein/DNA complex; complexed with edo
      4. 2052927Domain d3rn2b2: 3rn2 B:250-339 [233475]
        automated match to d2oq0a1
        protein/DNA complex; complexed with edo
    2. Domains for 3rn5:
      1. 2052928Domain d3rn5a1: 3rn5 A:147-249 [233473]
        automated match to d2oq0d2
        protein/DNA complex; complexed with edo
      2. 2052929Domain d3rn5a2: 3rn5 A:250-340 [233474]
        automated match to d2oq0a1
        protein/DNA complex; complexed with edo
      3. 2052930Domain d3rn5b1: 3rn5 B:147-249 [233476]
        automated match to d2oq0d2
        protein/DNA complex; complexed with edo
      4. 2052931Domain d3rn5b2: 3rn5 B:250-340 [233477]
        automated match to d2oq0a1
        protein/DNA complex; complexed with edo
      5. 2052932Domain d3rn5c1: 3rn5 C:147-249 [233480]
        automated match to d2oq0d2
        protein/DNA complex; complexed with edo
      6. 2052933Domain d3rn5c2: 3rn5 C:250-340 [233481]
        automated match to d2oq0a1
        protein/DNA complex; complexed with edo
      7. 2052934Domain d3rn5d1: 3rn5 D:148-249 [233478]
        automated match to d2oq0d2
        protein/DNA complex; complexed with edo
      8. 2052935Domain d3rn5d2: 3rn5 D:250-340 [233479]
        automated match to d2oq0a1
        protein/DNA complex; complexed with edo
  2. 2052936Mouse (Mus musculus) [TaxId:10090] [234954] (4 PDB entries)
    1. Domains for 4jbj:
      1. 2052943Domain d4jbja1: 4jbj A:3-112 [252860]
        Other proteins in same PDB: d4jbja3, d4jbjb3
        automated match to d2oq0d2
      2. 2052944Domain d4jbja2: 4jbj A:113-199 [252861]
        Other proteins in same PDB: d4jbja3, d4jbjb3
        automated match to d2oq0a1
      3. 2052945Domain d4jbjb1: 4jbj B:3-112 [252862]
        Other proteins in same PDB: d4jbja3, d4jbjb3
        automated match to d2oq0d2
      4. 2052946Domain d4jbjb2: 4jbj B:113-199 [252863]
        Other proteins in same PDB: d4jbja3, d4jbjb3
        automated match to d2oq0a1
    2. Domains for 4jbk:
      1. 2052947Domain d4jbka1: 4jbk A:3-112 [252864]
        automated match to d2oq0d2
        protein/DNA complex
      2. 2052948Domain d4jbka2: 4jbk A:113-199 [252865]
        automated match to d2oq0a1
        protein/DNA complex
      3. 2052949Domain d4jbkb1: 4jbk B:3-112 [252866]
        automated match to d2oq0d2
        protein/DNA complex
      4. 2052950Domain d4jbkb2: 4jbk B:113-199 [252867]
        automated match to d2oq0a1
        protein/DNA complex
      5. 2052951Domain d4jbkc1: 4jbk C:3-112 [252868]
        automated match to d2oq0d2
        protein/DNA complex
      6. 2052952Domain d4jbkc2: 4jbk C:113-199 [252869]
        automated match to d2oq0a1
        protein/DNA complex
      7. 2052953Domain d4jbkd1: 4jbk D:3-112 [252870]
        automated match to d2oq0d2
        protein/DNA complex
      8. 2052954Domain d4jbkd2: 4jbk D:113-199 [252871]
        automated match to d2oq0a1
        protein/DNA complex
    3. Domains for 4jbm:
      1. 2052939Domain d4jbma1: 4jbm A:2-97 [234955]
        Other proteins in same PDB: d4jbma3, d4jbmb3
        automated match to d2oq0d2
        protein/DNA complex
      2. 2052940Domain d4jbma2: 4jbm A:98-193 [234957]
        Other proteins in same PDB: d4jbma3, d4jbmb3
        automated match to d2oq0a1
        protein/DNA complex
      3. 2052941Domain d4jbmb1: 4jbm B:2-97 [234956]
        Other proteins in same PDB: d4jbma3, d4jbmb3
        automated match to d2oq0d2
        protein/DNA complex
      4. 2052942Domain d4jbmb2: 4jbm B:98-187 [234958]
        Other proteins in same PDB: d4jbma3, d4jbmb3
        automated match to d2oq0a1
        protein/DNA complex
    4. Domains for 4l5q:
      1. 2052937Domain d4l5qa1: 4l5q A:46-155 [253527]
        Other proteins in same PDB: d4l5qa3
        automated match to d2oq0d2
      2. 2052938Domain d4l5qa2: 4l5q A:156-243 [253528]
        Other proteins in same PDB: d4l5qa3
        automated match to d2oq0a1

More info for Protein automated matches from b.40.16.0: automated matches

Timeline for Protein automated matches from b.40.16.0: automated matches: