SCOPe 2.08: Domain d3rf3b1: 3rf3 B:1-128

Lineage for d3rf3b1 (3rf3 B:1-128)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.24: Four-helical up-and-down bundle [47161] (29 superfamilies)
   core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down

4. Superfamily a.24.9: alpha-catenin/vinculin-like [47220] (2 families)

5. Family a.24.9.1: alpha-catenin/vinculin [47221] (3 proteins)
   possible duplication: contains several domains of this fold
   The listed PDB entries contain different large fragments but not the whole proteins

6. Protein automated matches [226863] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [224995] (5 PDB entries)

8. Domain d3rf3b1: 3rf3 B:1-128 [233444]
   automated match to d1syqa1
   complexed with cac

Details for d3rf3b1

PDB Entry: 3rf3, 1.61 Å

PDB Description: Shigella IpaA-VBS3 in complex with human vinculin

PDB Compounds: (B:) vinculin

SCOPe Domain Sequences for d3rf3b1:

Sequence; same for both SEQRES and ATOM records:

>d3rf3b1 a.24.9.1 (B:1-128) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mpvfhtrtiesilepvaqqishlvimheegevdgkaipdltapvaavqaavsnlvrvgke
tvqttedqilkrdmppafikvenactklvqaaqmlqsdpysvpardylidgsrgilsgts
dllltfde

Timeline for d3rf3b1:

• d3rf3b1 first appeared in SCOPe 2.03
  
• d3rf3b1 appears in SCOPe 2.07